Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficus_20carica_20[genbank_20GCA_5F002002945.1_202017-01-27] 27,995 sequences; 247,090,738 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq783 87.8 8e-13 >seq783 Length=84026 Score = 87.8 bits (96), Expect = 8e-13 Identities = 112/153 (73%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || |||||||| ||||||||||| | | |||||| ||||| ||||| | ||| | Sbjct 12994 CGCGTGCCAAACTGGCCATTTGGCATAAGAAGATTAATGTTGTTGCTACCAACATAATCC 13053 Query 65147 TGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGT 65206 || |||||||| || || | | | |||| ||||| || || || ||||||| Sbjct 13054 TGGGCCATTCCAATGATAGTACCGGCGAGACTCTGCTCACCATGGTGGTAGGCTGAATGC 13113 Query 65207 TCAGAGACATATCCACTAAATTGAGCAA-CTTT 65238 ||||| ||||| ||| ||| ||||||| |||| Sbjct 13114 TCAGATACATAACCAGAAAACTGAGCAATCTTT 13146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235599588561750