Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq48708 129 7e-25 seq58370 125 8e-24 seq49026 122 1e-22 seq67744 118 1e-21 seq80270 113 5e-20 seq76293 113 5e-20 seq2078 109 6e-19 seq102053 104 3e-17 seq66408 104 3e-17 seq28101 100 3e-16 seq101134 98.7 1e-15 seq108940 89.7 6e-13 seq57720 86.0 7e-12 >seq48708 Length=2547 Score = 129 bits (142), Expect = 7e-25 Identities = 152/203 (75%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 281 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 222 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || |||||||||| ||| || |||| ||| Sbjct 221 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 163 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || ||||| |||| |||||||| || |||||||| || || | Sbjct 162 TGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCA 103 Query 43171 CAAAGATTTGCATTTTTACGCCG 43193 | ||||| ||||| ||||| || Sbjct 102 CGAAGATCTGCATGGTTACGGCG 80 >seq58370 Length=11695 Score = 125 bits (138), Expect = 8e-24 Identities = 162/220 (74%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| |||| ||| ||||||||||||||| || ||||| || |||| | Sbjct 2830 ACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCAAGTGTCCTTCC 2771 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||| || || || | | ||||||||| | || | | |||||| Sbjct 2770 ATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTT 2711 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| |||| | ||| | | | | ||||| ||| |||||| || | | Sbjct 2710 GTCC-TGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---TTCCACTTCCAAAG 2655 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||||||||| || || ||||| |||||||||||||| Sbjct 2654 TGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 2615 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||||||||| ||||| || || ||| | || || |||||||||||||| || Sbjct 2121 TCCTTTTGAATATTGTAGTCAGCAAGGGTGCGCCCATCCTCAAGCTGCTTACCAGCAAAA 2062 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | | ||||| || | || | || |||||||| |||||| ||||| | Sbjct 2061 ATCAACCTTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTGACATTA 2002 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| ||| ||| || || | |||||||| ||||| || || ||||| Sbjct 2001 TCAATGGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTG 1945 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 1944 ACGAAGATCTGCAT 1931 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | || ||||| || || |||||||| || ||||| || | Sbjct 2602 ACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCTGCAAGAGTGCGACC 2543 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || |||||||| || || || || ||||| | ||||||||| | || | || |||||| Sbjct 2542 ATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTT 2483 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| | |||| |||| | | | || || ||| || || || | | Sbjct 2482 GTCC-TGAATCTTTGCCTTGACATTGTCAATTGTATCAGAACTC---TCAACCTCCAAGG 2427 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || || || ||||| |||||||||||||| Sbjct 2426 TGATTGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 2387 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| |||||||| |||||||| || || | || || |||||||| ||||| || Sbjct 2349 TCCTTTTGGATATTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAG 2290 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || |||| ||||||||| | || | | || ||||| ||| ||| || | ||| Sbjct 2289 ATAAGTCTCTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTTTGCCTTCA-CGTT 2231 Query 43113 GCCACCG-TGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | || | |||| ||| || || || | || |||||||| || || || ||||| Sbjct 2230 GTCAATGGTGTCAGAACTC---TCAACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTT 2174 Query 43169 TACAAAGATTTGCAT 43183 |||||||||||||| Sbjct 2173 CACAAAGATTTGCAT 2159 >seq49026 Length=4188 Score = 122 bits (134), Expect = 1e-22 Identities = 147/196 (75%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || |||||||| |||| |||||| |||| || |||||||| || ||||| Sbjct 730 CTCCTTCTGGATGTTGTAATCGGCCAAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 671 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||||| || | || |||||||||| ||| || |||| ||| Sbjct 670 GATGAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 612 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| |||| |||||||| ||||| || || || | Sbjct 611 TGTCGATGGTGTCGGAGCTC---TCCACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTT 555 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||| ||||| Sbjct 554 TCACGAAGATCTGCAT 539 Score = 89.7 bits (98), Expect = 6e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| || ||||||||||||||||| || || | || || Sbjct 1203 ACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGGGTACGACCATCCTCG 1144 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | | ||||||||| | || | | ||||| ||| | Sbjct 1143 AGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCCTGG 1084 Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 || || |||| ||| | | | |||||| |||| ||||| || | || ||||| Sbjct 1083 ATCTTGGCCTTGA-CGTTGTCAATCGTGTCAGAGCTC---TCCACCTCCAGGGTAATGGT 1028 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || | ||||| |||||||| ||||| Sbjct 1027 CTTCCCTGTCAAAGTCTTCACAAAGATCTGCAT 995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || ||||||||||| || ||||||| | || || Sbjct 976 CACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCCTC 917 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | ||||| |||||||| || | | ||||||||| | || | | ||||||||| Sbjct 916 CAATTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTG 857 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149 ||| || |||| ||| | | | || || |||| ||||| |||| ||||| | Sbjct 856 GATCTTGGCCTTGA-CGTTGTCGATGGTATCAGAGCTC---TCCACCTCGAGAGTGATCG 801 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || ||||| || || || ||||| ||||| Sbjct 800 TCTTTCCGGTTAGGGTTTTGACGAAGATCTGCAT 767 >seq67744 Length=10152 Score = 118 bits (130), Expect = 1e-21 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | ||| ||||| | ||| |||||||||||| |||||||||||| Sbjct 68 CCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCC 127 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || |||||||| ||||| || ||||||| ||||||||| | || Sbjct 128 AGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 187 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | ||| || ||| ||| | |||| | ||| | | | ||||| ||| || Sbjct 188 ATACCCTCTTTATCC-TGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTC---TC 243 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || |||||||| || || || ||||| |||||||||||||| Sbjct 244 AACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 294 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||||||||| ||||| || || || | | || |||||||| ||||| || Sbjct 332 TCCTTTTGAATATTGTAGTCAGCAAGGGTGCGTCCATTCTCGAGCTGCTTTCCAGCAAAA 391 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || |||| |||||||| | || | || ||||| || |||||| ||||| | Sbjct 392 ATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGGATTTTGGCTTTGACATTG 451 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| ||| ||| || || | |||||||| ||||| || || ||||| Sbjct 452 TCAATGGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTA 508 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 509 ACGAAGATCTGCAT 522 >seq80270 Length=12149 Score = 113 bits (124), Expect = 5e-20 Identities = 145/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| |||||||| || |||||||| | || || |||||||||||||| || Sbjct 1697 CTCCTTTTGAATGTTGTAATCTGCTAGAGTCCGACCATCTTCAAGCTGCTTACCAGCAAA 1638 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 |||||| | ||||||||| | || | || |||||||||| ||| | |||| ||| | Sbjct 1637 TATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTTGCTTTCACAT 1579 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || || ||| || || || | || ||||| || || || || |||| Sbjct 1578 TATCAATTGTATCAGAACTC---TCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCT 1522 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 1521 TCACAAAGATCTGCAT 1506 Score = 102 bits (112), Expect = 9e-17 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| |||||||| ||||||||||| ||||| || || ||||| | |||| || Sbjct 1258 ACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCC 1199 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | ||| ||||| || || ||||| | |||||| || | || | | |||||||||| | Sbjct 1198 AACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGG 1139 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 || ||| ||| | | | | || || ||| |||||| || | ||||| || Sbjct 1138 ATCTTTGCTTTAACATTGTCAATTGTATCAGAGCT---TTCCACCTCCAATGTGATTGTC 1082 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || || ||||| ||||||||||||||| Sbjct 1081 TTCCCAGTCAGGGTCTTCACAAAGATTTGCATT 1049 Score = 102 bits (112), Expect = 9e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | ||||||||||| || |||||| || || |||||||| ||| Sbjct 1504 CCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCC 1445 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | || || |||||||| || || || ||||| | ||||||||| | || Sbjct 1444 AGTGTCCTACCATCCTCGAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 1385 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | || || |||||| ||| | || | |||| | | | ||||| ||| ||| Sbjct 1384 ATGCCTTCTTTGTCC-TGAATCTTCGCCTTGACATTATCAATTGTGTCTGAGCT---TTC 1329 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||| || | || || ||||| || || | ||||| ||||||||||||||| Sbjct 1328 CACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 1277 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||||||||| ||||| || || || | || || |||||||||||||| || Sbjct 784 TCCTTTTGAATATTGTAGTCAGCAAGGGTGCGTCCATCCTCAAGCTGCTTACCAGCAAAA 725 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | | |||||||| | || | | ||||||||| ||| ||| |||| | Sbjct 724 ATCAACCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATCTTTGCCTTGACATTG 665 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| ||| ||| || |||| ||||| || ||||| || || || || Sbjct 664 TCAATAGTGTCAGAGCT---TTCAACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTC 608 Query 43170 ACAAAGATTTGCAT 43183 |||||||| ||||| Sbjct 607 ACAAAGATCTGCAT 594 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| |||||||| |||||||| || || | || || |||||||| ||||| || Sbjct 1012 TCCTTTTGGATATTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAG 953 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || |||| ||||||||| | || | | || ||||| ||| ||| || | ||| Sbjct 952 ATAAGTCTCTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGGATCTTTGCCTTCA-CGTT 894 Query 43113 GCCACCG-TGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | || | |||| ||| || || || | || |||||||| || || || ||||| Sbjct 893 GTCAATGGTGTCAGAACTC---TCAACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTT 837 Query 43169 TACAAAGATTTGCAT 43183 |||||||||||||| Sbjct 836 CACAAAGATTTGCAT 822 >seq76293 Length=4593 Score = 113 bits (124), Expect = 5e-20 Identities = 145/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| |||||||| |||||||||| | | || || |||||||||||||| || Sbjct 529 CTCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGCTTACCAGCAAA 470 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 |||||| | ||||||||| | || | || ||||||||| ||| | |||| ||| | Sbjct 469 TATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCC-TGAATCTTTGCTTTCACAT 411 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || || ||| || || || | || ||||| || || || || |||| Sbjct 410 TATCAATTGTATCAGAACTC---TCTACCTCCAAGGTTATGGTCTTTCCAGTAAGTGTCT 354 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 353 TCACAAAGATCTGCAT 338 Score = 111 bits (122), Expect = 2e-19 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | ||||||||||| || ||| || ||||| |||||||| ||| Sbjct 336 CCACCACGTAGACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCC 277 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| |||| || |||||||| || || || ||||| | ||||||||| | || Sbjct 276 AGTGTCCTGCCGTCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 217 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | || || |||||| ||| | |||| |||| | | | ||||| ||| ||| Sbjct 216 ATGCCTTCTTTGTCC-TGAATCTTTGCCTTGACATTATCAATTGTGTCTGAGCT---TTC 161 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||| || | || |||||||| || || | ||||| ||||| ||||||||| Sbjct 160 CACTTCCAAAGTAATGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCATT 109 >seq2078 Length=2300 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | || |||||| || |||||||||||||| || || || | Sbjct 1925 ACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCAAGGGTTCGGCC 1866 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| ||||| || || || ||||||||||| | || | | |||||| Sbjct 1865 ATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTT 1806 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| | || | | | ||| | | | ||||| || ||||| || | |||| Sbjct 1805 GTCC-TGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGA 1747 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| || || || || || || |||||||| Sbjct 1746 TAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 1710 >seq102053 Length=8183 Score = 104 bits (114), Expect = 3e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||| || || ||||| Sbjct 4361 CTCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCCTCGAGCTGTTTCCCGGCGAA 4420 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || ||||||||| ||| || || | | Sbjct 4421 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATT 4480 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || ||||| || | ||||| || || |||||||| || || || Sbjct 4481 GTCGATGGTGTCGGAGGACTCCACCTCCAGAGTGATCGTCTTCCCCGTTAGGGTTTTCAC 4540 Query 43172 AAAGATTTGCATTTTTACGCCG 43193 ||||| ||||| || ||||| Sbjct 4541 GAAGATCTGCATCTTGGCGCCG 4562 >seq66408 Length=4853 Score = 104 bits (114), Expect = 3e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| ||||| || ||||||||||| ||||| || || ||||| | |||| || Sbjct 203 ACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCC 262 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | ||| ||||| || || ||||| | |||||| || | || | | |||||||||| | Sbjct 263 AACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGG 322 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || ||| |||| | | | || ||| |||||| || | ||||| || || Sbjct 323 ATCTTTGCCTTGACATTGTCAATTGTATCGGAGCTTTCCACCTCCAGGGTGATTGTCTTC 382 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || ||||||||||||||||| |||||| Sbjct 383 CCAGTAAGCGTCTTTACAAAGATCTGCATT 412 Score = 104 bits (114), Expect = 3e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| |||||||||||||| || || || | || |||||||| || || || ||| Sbjct 449 TCCTTTTGGATATTGTAATCAGCAAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAT 508 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | |||||| || | || | || |||||||||| ||| ||| |||| | Sbjct 509 ATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTA 568 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||| || ||| || || || | |||||||| || || || || ||||| Sbjct 569 TCGATCGTATCAGAACTC---TCAACCTCTAATGTGATGGTCTTCCCTGTGAGAGTCTTA 625 Query 43170 ACAAAGATTTGCAT 43183 |||||||| ||||| Sbjct 626 ACAAAGATCTGCAT 639 Score = 89.7 bits (98), Expect = 6e-13 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 43001 AATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCG 43060 ||| ||||| || || ||||| | |||| || | ||| ||||| || || ||||| | Sbjct 1 AATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCT 60 Query 43061 CTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGT 43120 |||||| || | || | | |||||||||| ||||||| |||| | | | || Sbjct 61 CTGCTGATCTGGGGGGATACCCTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATTGT 120 Query 43121 GTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTG 43180 ||| |||||| || | ||||| || || || || ||||||||||||||||| || Sbjct 121 ATCGGAGCTTTCCACCTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTG 180 Query 43181 CATT 43184 |||| Sbjct 181 CATT 184 >seq28101 Length=418 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| |||||||| || ||||||| | | || || |||||||| |||||||| Sbjct 19 CTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCGAGCTGCTTTCCAGCGAA 78 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 |||||| | ||||||||| | || | || |||||| ||| ||| | || | ||| | Sbjct 79 TATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCC-TGAATCTTGGCTTTCACAT 137 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||| || ||| || || || | || ||||| || || || || || | Sbjct 138 TGTCAATCGTATCTGAACTC---TCTACCTCCAATGTTATGGTCTTCCCGGTCAGAGTTT 194 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 195 TGACAAAGATCTGCAT 210 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/199 (71%), Gaps = 8/199 (4%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| |||| ||| ||||||||||||||| || || || || |||| | Sbjct 223 ACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTTCC 282 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||| || || || | | ||||||||| | || | | |||||| Sbjct 283 ATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTT 342 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 ||| ||| |||| | ||| | | | | ||||| ||| |||||| || | | Sbjct 343 ATCC-TGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---TTCCACTTCCAAAG 398 Query 43144 TGATGGTTTTGCCCGTTAG 43162 ||||||||||||| || || Sbjct 399 TGATGGTTTTGCCGGTAAG 417 >seq101134 Length=8483 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | ||| ||||| || || |||||||| |||| || || | Sbjct 8102 ACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAAGGTGCGGCC 8161 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| ||||| || || || ||||||||||| | || | | |||||| Sbjct 8162 ATCCTCAAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTT 8221 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| | || | |||| | | | ||||| |||| ||||| || | | Sbjct 8222 GTCC-TGAATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTC---TCCACCTCCAAGG 8277 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || || || | ||||| |||||||| ||||| Sbjct 8278 TGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 8317 >seq108940 Length=601 Score = 89.7 bits (98), Expect = 6e-13 Identities = 130/180 (72%), Gaps = 8/180 (4%) Strand=Plus/Plus Query 43008 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 43067 ||||| |||| ||| || | || || | |||||| || ||||| ||||| | ||||||| Sbjct 183 TAATCTGCCAAAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGCCTCTGCTGG 242 Query 43068 TCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCG-- 43124 || | || | || |||||||||| || || |||| ||| | | | |||||| Sbjct 243 TCAGGGGGGATGCCCTCCTTGTCCTGGACCTTGGCCTTGA-CGTTGTCGATGGTGTCGGA 301 Query 43125 -CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| |||| |||||||| ||||||||||| || || || || || ||||| Sbjct 302 ACTC---TCCACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTTTTCACGAATATCTGCAT 358 >seq57720 Length=9334 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| ||||| |||||||||||||| || || |||| || Sbjct 8046 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTACGACCGTCCTCG 7987 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | | ||||||||| | || | | ||||| ||| | Sbjct 7986 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGG 7927 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 || || ||||| | | | || || |||| || || || | |||||||| Sbjct 7926 ATCTTGGCTTTGACATTATCAATGGTATCCGAGCTC---TCAACCTCCAAAGTGATGGTC 7870 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || | ||||| ||||| || ||||| Sbjct 7869 TTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 7838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570975441334160