Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq80815 122 1e-22 >seq80815 Length=8550 Score = 122 bits (134), Expect = 1e-22 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 66206 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 66265 || |||| ||| |||||||| | || | ||| || | |||| |||||| || ||| || Sbjct 7243 CCTTTTGCCTCCCCCCTGATCAACATAACGAGCAGTATCATTAAAAACTCGCAGCATAGG 7302 Query 66266 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATT 66325 ||| || ||||||||||| ||||| || || |||||||| ||| | |||||||| || Sbjct 7303 AATGATGCCATTGGATGTCCCATTTGTTCCACGAATATAGCTGCCAGTGGCACGAATGTT 7362 Query 66326 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 66385 || || | ||| |||||||| || ||| ||| | || ||| || || || Sbjct 7363 GTGAACGGAGACACCAATTCCCCCAGCTGATTTGCTGATGACAGCACATTCCTTCAAGGT 7422 Query 66386 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 66437 |||||| ||||| || || |||||||| ||||| | || || |||||| Sbjct 7423 ATCATATATGCCTTCAATGCTATCATCTTTCATGCATACAAGGAAGCAGCTA 7474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657203459554480