Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq112910 102 2e-17 >seq112910 Length=6904 Score = 102 bits (112), Expect = 2e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 19956 TTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTG 20015 |||| ||||| ||||| || |||||||| || || || || || || ||||| ||||| Sbjct 4225 TTCGATCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTG 4284 Query 20016 ATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTC 20075 || || |||||||| ||| || ||||||||||||||||| ||||| | ||| ||| Sbjct 4285 ATCTTCTAATATGCTAGTTTTAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGG 4344 Query 20076 CCCGTGGTTGGCATATGGCTTACC 20099 || || || || || ||| | ||| Sbjct 4345 CCTGTAGTAGGTATCTGGTTCACC 4368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144239506521432