Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_006884.2 Length=178249 Score E Sequences producing significant alignments: (Bits) Value seq112910 109 6e-19 >seq112910 Length=6904 Score = 109 bits (120), Expect = 6e-19 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 171332 TTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTA 171391 |||| ||||| |||||||| ||||| || || || |||||||| || || || |||| Sbjct 4225 TTCGATCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTG 4284 Query 171392 ATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTC 171451 |||||| | ||||| || ||||| |||||||| |||||||||||| | |||| | Sbjct 4285 ATCTTCTAATATGCTAGTTTTAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGG 4344 Query 171452 CCTGTAGTCTGTGTATGGTTAACCTCTATG 171481 |||||||| || | ||||| ||| || || Sbjct 4345 CCTGTAGTAGGTATCTGGTTCACCGCTTTG 4374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569428922368080