Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq48708 134 3e-26 seq67744 131 4e-25 seq57720 127 5e-24 seq102053 125 2e-23 seq58370 123 6e-23 seq49026 122 2e-22 seq62381 114 3e-20 seq80270 111 4e-19 seq101134 107 5e-18 seq66408 104 6e-17 seq115991 91.5 3e-13 seq28101 87.8 4e-12 seq2078 87.8 4e-12 >seq48708 Length=2547 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 316 CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCG 257 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 256 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 197 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || ||||| || || | ||| || || || Sbjct 196 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 137 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || || || || ||||| |||||||| Sbjct 136 TCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 90 >seq67744 Length=10152 Score = 131 bits (144), Expect = 4e-25 Identities = 174/238 (73%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||||||||| || || || |||| || ||| ||||| ||||| |||| Sbjct 292 CATG-CCACCGCGGAGTCTGAGCACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGT 350 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || |||||||| | || | || ||||| || || ||||| | || || | Sbjct 351 CAGCAAGGGTGCGTCCATTCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTG---GT 407 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 ||||| || ||||| ||||| |||||||| ||||| || || || || | || || Sbjct 408 CTGGGGGAATGCCTTCCTTATCTTGGATTTTGGCTTTGACATTGTCAATGGTGTCAGAGC 467 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| || || || ||||| ||||| || || |||||||| ||||| |||||||| Sbjct 468 T---TTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 522 Score = 87.8 bits (96), Expect = 4e-12 Identities = 162/235 (69%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | ||| || | ||||| ||| || ||||| || || || | Sbjct 64 CATG-CCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAAT 122 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || || || | || || || || ||||| || | ||| || Sbjct 123 CAGCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTG 182 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 |||||| || ||||||||||| || || || |||||||| || || | || ||| Sbjct 183 GTGGGATACCCTCTTTATCCTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTC- 241 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | || || || ||||| || |||||||| || || || ||||| Sbjct 242 --TCAACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 294 >seq57720 Length=9334 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || || || || | ||| | || || || |||||||| || || || Sbjct 7836 CCACCACGAAGCCTGAGCACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCA 7777 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || || || ||||| || || ||||| |||| | ||| ||| |||| Sbjct 7776 AGGGTCCTGCCATCCTCCAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGG 7717 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || || || ||||| || || | ||| |||| || Sbjct 7716 ATCCCTTCCTTATCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCTC---TCG 7660 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||||||||| || || |||||||| |||||||| Sbjct 7659 ACCTCGAGAGTGATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 7610 Score = 109 bits (120), Expect = 1e-18 Identities = 143/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||||||| || || ||||| || | || ||||| |||||| Sbjct 7572 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAG 7513 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| || || || |||||||| || || || ||||| Sbjct 7512 ATTAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 7453 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || ||||| ||||| ||||| ||||| || || || Sbjct 7452 TCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTTTTC 7396 Query 288460 ACGAATATCTGCATTAT 288476 ||||| || ||||| || Sbjct 7395 ACGAAAATTTGCATGAT 7379 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || || | |||| ||| || || || || || || || || Sbjct 8064 CCGCCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCC 8005 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || || ||||||| | ||| || |||| Sbjct 8004 AGGGTACGACCGTCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 7945 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || ||||| || || || || | ||| |||| || Sbjct 7944 ATCCCTTCCTTATCCTGGATCTTGGCTTTGACATTATCAATGGTATCCGAGCTC---TCA 7888 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| || |||| |||||| || || |||||||| Sbjct 7887 ACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 7838 >seq102053 Length=8183 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || || || | || || || ||||| || ||||||||| Sbjct 4326 CCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 4385 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | ||||| || |||||||| || ||||| || ||| Sbjct 4386 AGTGTGCGGCCGTCCTCGAGCTGTTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 4445 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || ||||| || || ||||| || || || | ||| || || || Sbjct 4446 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGACTCCACC 4505 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||| || || || || ||||| |||||||| Sbjct 4506 TCCAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 4552 >seq58370 Length=11695 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||||||||| || || || |||| || ||| ||||| ||||| ||||| || Sbjct 2157 CCACCGCGGAGTCTGAGAACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAGCA 2098 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || || |||| | || ||| ||| Sbjct 2097 AGGGTGCGCCCATCCTCAAGCTGCTTACCAGCAAAAATCAACCTTTGCTGATCCGGGGGG 2038 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || || |||||||| ||||| || || || || | || ||| ||| Sbjct 2037 ATGCCTTCCTTGTCTTGGATTTTGGCTTTGACATTATCAATGGTGTCAGAGCT---TTCA 1981 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || |||||||||||||| |||||||| Sbjct 1980 ACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 1931 Score = 111 bits (122), Expect = 4e-19 Identities = 167/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| |||||||| || || || |||| || ||| ||||||||||| |||| Sbjct 2389 CATG-CCACCACGGAGTCTGAGCACCAGGTGAAGAGTAGATTCCTTTTGGATATTGTAGT 2331 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || || || | || || || || ||||| || | ||| || Sbjct 2330 CAGCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCTG 2271 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 |||||| |||||||| || ||||| || || |||||||| || || | || ||| Sbjct 2270 GTGGGATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTC- 2212 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | || || || ||||| || |||||||| || || || ||||| Sbjct 2211 --TCAACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 2159 Score = 98.7 bits (108), Expect = 2e-15 Identities = 163/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | || | ||| || ||||| ||||||||||| || Sbjct 2841 CCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCA 2782 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | || || ||||| || |||| | ||| || |||||| Sbjct 2781 AGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTG---GTCTGGG 2725 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || ||||| ||||| |||||||| || || || | || ||| | Sbjct 2724 GGAATACCCTCCTTGTCCTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---T 2668 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| | ||||| || || ||||| || |||||||| || || ||||| Sbjct 2667 TCCACTTCCAAAGTGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 2615 >seq49026 Length=4188 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| || || || || || | || || || ||||| ||||| |||||| Sbjct 957 TCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCCTCCAATTGCTTTCCAGCGAAG 898 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || |||||| ||||| || |||||||| || || || ||||| Sbjct 897 ATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 838 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| |||| || || ||||| ||||||||||| ||||| || || ||| Sbjct 837 TCGATGGTATCAGAGCTC---TCCACCTCGAGAGTGATCGTCTTTCCGGTTAGGGTTTTG 781 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 780 ACGAAGATCTGCAT 767 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | |||| ||| || || |||||||| || || || Sbjct 1221 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCC 1162 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || ||||| ||||||| | ||| || |||| Sbjct 1161 AGGGTACGACCATCCTCGAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGG 1102 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || || || ||||| || || | || |||| || Sbjct 1101 ATACCTTCCTTATCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCAGAGCTC---TCC 1045 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || |||||||| |||| |||||| || || |||||||| Sbjct 1044 ACCTCCAGGGTAATGGTCTTCCCTGTCAAAGTCTTCACAAAGATCTGCAT 995 >seq62381 Length=5639 Score = 114 bits (126), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || || || | || || | || ||||| ||||| || || || ||| Sbjct 656 TCCTTTTGGATGTTGTAACCG-CAAGAGTTCTACCATCTTCCAATTGCTTGCCAGCAAAG 714 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||||||| | ||||| |||||||| |||||| | || ||||| || || Sbjct 715 ATCAGTCTCTGTTGATCTACAGGGATGCCTTCTTTGTCCTGGGTCTTGGCTTTGACATTG 774 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || | ||||| ||||||||||||||| | || ||| Sbjct 775 TCGATGGTATCACTGCTCTCGACCTCAATAGTGATGGTCTTCCCGGTCAGAATTTTCACG 834 Query 288463 AATATCTGCATTATGTTATT 288482 || || ||||| |||| || Sbjct 835 AAAATTTGCATATTGTTTTT 854 >seq80270 Length=12149 Score = 111 bits (122), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| |||||||| || || || |||| || ||| ||||||||||| ||||| || Sbjct 1049 TCCACCACGGAGTCTGAGCACCAGGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCAGC 990 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || || || | || || || || ||||| || | ||| || ||| Sbjct 989 CAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGG 930 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 ||| |||||||| || ||||| || || |||||||| || || | || ||| || Sbjct 929 GATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTC---TC 873 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || || ||||| || |||||||| || || || ||||| Sbjct 872 AACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 822 Score = 107 bits (118), Expect = 5e-18 Identities = 167/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||||||||| || || || |||| || ||| ||||| ||||| ||||| || Sbjct 820 CCACCGCGGAGTCTGAGAACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAGTCAGCA 761 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || |||||||| || || | || || || || || |||| || || ||| ||| Sbjct 760 AGGGTGCGTCCATCCTCAAGCTGCTTACCAGCAAAAATCA-AC-CT-TTGCTGGTCTGGG 704 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 |||||||| || || || ||||| || || || || || || |||| || ||| | Sbjct 703 GGGATTCCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCT---T 647 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || || || || || || || |||||||| Sbjct 646 TCAACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 594 >seq101134 Length=8483 Score = 107 bits (118), Expect = 5e-18 Identities = 165/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | ||||| ||| ||| || ||||| || || || || Sbjct 8091 CCACCACGGAGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCC 8150 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | || ||||| || |||||||||||||| || || ||| Sbjct 8151 AAGGTGCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGACGCTGCTG---GTCCGGG 8207 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||| || || ||||| || || || || || || || || | || |||| Sbjct 8208 GGAATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTC--- 8264 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| ||||||| |||||||| || |||||||| Sbjct 8265 TCCACCTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 8317 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| || || || |||||||| ||||| ||| Sbjct 7635 CCACCACGAAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCTGCG 7694 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || ||||| || | ||| || ||| Sbjct 7695 AGGGTACGCCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGA 7754 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || || || || || || ||||| || || || | || |||| || Sbjct 7755 ATCCCCTCCTTGTCTTGAATCTTGGCCTTCACATTGTCAATGGTGTCTGAGCTC---TCC 7811 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| |||||||| || ||||||||||| || |||||||| Sbjct 7812 ACCTCAAGGGTGATGGTCTTCCCTGTAAGAGTCTTGACAAAAATCTGCAT 7861 >seq66408 Length=4853 Score = 104 bits (114), Expect = 6e-17 Identities = 165/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || || |||| || ||| ||||||||||| || || || Sbjct 412 TCCACCACGCAGACGGAGCACCAGGTGAAGAGTAGATTCCTTTTGGATATTGTAATCAGC 471 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 || ||||| || || |||| ||||| || || || || || | ||| || |||| Sbjct 472 AAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAATATGAGCCTCTGCTG---ATCTGG 528 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 ||||| || || || |||||||| || || || || || || || | ||| ||| Sbjct 529 GGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCGATCGTATCAGAACTC-- 586 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| || |||||||| || || |||||||| Sbjct 587 -TCAACCTCTAATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 639 Score = 102 bits (112), Expect = 2e-16 Identities = 135/186 (73%), Gaps = 6/186 (3%) Strand=Plus/Plus Query 288292 ATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGC 288351 || || ||||| || || || | |||||| || || ||||| ||||| ||||| || | | Sbjct 2 ATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTC 61 Query 288352 TGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408 || ||| |||||| || || || || ||||||||||| || || || || || || Sbjct 62 TGCTGA---TCTGGGGGGATACCCTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATT 118 Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468 | |||| ||| || || | ||||| |||||||| || || ||||| || || ||| Sbjct 119 GTATCGGAGCTTTCCACCTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATC 178 Query 288469 TGCATT 288474 |||||| Sbjct 179 TGCATT 184 >seq115991 Length=9835 Score = 91.5 bits (100), Expect = 3e-13 Identities = 123/169 (73%), Gaps = 7/169 (4%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || || || ||||| || | || | || |||||||| |||| Sbjct 6254 CATG-CCACCACGAAGCCTGAGCACGAGGTGGAGAGTCGACTACTTCTGGATATTGTAGT 6196 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||||||| || || |||| || | || ||||| || ||||| || | |||||| || Sbjct 6195 CGGCGAGGGTCCGGCCGTTCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTG---AT 6139 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTAT 288407 || ||||| ||||| || |||||||| || ||||| ||||| || || Sbjct 6138 CTGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGAT 6090 Score = 87.8 bits (96), Expect = 4e-12 Identities = 160/230 (70%), Gaps = 11/230 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || | || || || | || ||||| ||||||||||| ||||| Sbjct 6473 CCACCACGGAGACTGAAAACAAGGTGCAGGGTAGACTCTTTCTGGATATTATAATCGGCC 6414 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || || || ||||| || ||||||| || ||| | | ||| Sbjct 6413 AAAGTACGACCATCCTCCAACTGCTTTCCGGCAAAGATCA-AC-CTGATCCG---GCGGG 6359 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || ||||| || || || ||||| || || || || | ||| |||| || Sbjct 6358 ATACCCTCCTTATCTTGAATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTC---TCC 6302 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| || |||| || ||| || || |||||||| Sbjct 6301 ACCTCCATAGTGATGGTCTTGCCAGTCAAAGACTTCACAAAAATCTGCAT 6252 >seq28101 Length=418 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/215 (70%), Gaps = 12/215 (6%) Strand=Plus/Plus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || || |||| ||| || || || || || || || || || || | || || || Sbjct 2 ACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCG 61 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCC 288381 | || ||||| ||||| || || | ||| || |||||| || || || |||||| Sbjct 62 AGCTGCTTTCCAGCGAATATGAGCCTCTGCTGG---TCTGGGGGGATGCCCTCCTTATCC 118 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATC 288438 || || || |||||||| || || || | ||| ||| ||||| || | || || Sbjct 119 TGAATCTTGGCTTTCACATTGTCAATCGTATCTGAACTC---TCTACCTCCAATGTTATG 175 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||||||||| ||||| || |||||||| Sbjct 176 GTCTTCCCGGTCAGAGTTTTGACAAAGATCTGCAT 210 >seq2078 Length=2300 Score = 87.8 bits (96), Expect = 4e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | ||| | || || || |||||||| || || || Sbjct 1936 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCA 1877 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || |||||||||||||| || || ||| Sbjct 1876 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTG---GTCCGGG 1820 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || || || ||||| || || | || || || Sbjct 1819 GGAATACCCTCCTTGTCCTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCC 1760 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || || || ||||| || ||||| Sbjct 1759 ACCTCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 1710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177873600353316