Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq53411 98.7 1e-15 >seq53411 Length=6979 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || |||||||| || ||||| | ||| || |||| || || ||||| || || Sbjct 3138 TGGAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTCAGACCCGGCATCAGCCCG 3197 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | || ||||||||||| || || || || ||||| || |||||||| || ||||| ||| Sbjct 3198 CGCTTTTTTAGCCAAAATATCGCGCAGAAGCTTCCCGAGAAGAAGATCCCTTCCACGCAG 3257 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAG--GTCGAGACTTGTCGAACCACTTGAGAGCCC 119685 ||||| || | | ||||| || |||| |||| | ||||| ||| || || |||| Sbjct 3258 GCGAAGGCCACGATTCGCTCCGCGAAAGTCTCCGAGCC--GTCGATCCATTTCAGGGCCC 3315 Query 119686 AGTTGGCCTT 119695 | | ||||| Sbjct 3316 ACTGCGCCTT 3325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588108570871600