Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq66408 109 4e-19 seq101134 105 4e-18 seq58370 105 4e-18 seq80270 104 2e-17 seq67744 102 5e-17 seq48708 96.9 2e-15 seq76293 93.3 3e-14 seq87988 91.5 1e-13 seq57720 89.7 3e-13 seq2078 89.7 3e-13 seq28101 86.0 4e-12 seq49026 84.2 1e-11 seq52026 82.4 5e-11 >seq66408 Length=4853 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| |||||||||||||| ||||| | || | || |||| || Sbjct 658 AACCAAGTGGAGAGTGGACTCTTTCTGAATGTTGTAGTCAGCGAGTGTACGCCCATCCTC 717 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || ||||| || || | ||| ||||| | || | ||||||||||| Sbjct 718 GAGCTGCTTGCCAGCAAAGATCAGCCTTTGTTGGTCCGGGGGAATTCCCTCCTTGTCTTG 777 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| |||||| | || | ||| | ||||| |||| ||| ||||| || Sbjct 778 GATCTTTGCTTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCGAGGGTGATGGTCTT 837 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||||||||||||||| Sbjct 838 GCCTGTGAGGGTTTTCACAAAGATCTGCAT 867 Score = 104 bits (114), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || ||| || || || || || || | |||| | || |||| || Sbjct 431 ACCAGGTGAAGAGTAGATTCCTTTTGGATATTGTAATCAGCAAGGGTGCGGCCATCCTCT 490 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| ||||||||||| || | ||||| ||| | || | ||||||||||| Sbjct 491 AGCTGTTTGCCGGCAAATATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGG 550 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || ||||||| ||| |||||| || | || ||||| Sbjct 551 ATCTTTGCCTTGAC--AT--TATCGATCGTATCAGAACTCTCAACCTCTAATGTGATGGT 606 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||||||||| |||||||||||||| Sbjct 607 CTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 639 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | || ||| || |||||||| ||||| | ||| ||| | | || || Sbjct 202 AACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTC 261 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || |||||| || ||||| || || | ||||| ||| | || | ||||||||||| Sbjct 262 CAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTG 321 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATT-CACCGG---CCTCAACATCGACGGTTATGG 34947 ||||| ||||| || | || ||| | ||| || || || | ||| || | Sbjct 322 GATCTTTGCCTTGAC--AT--TGTCAATTGTATCGGAGCTTTCCACCTCCAGGGTGATTG 377 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || || ||||| |||||||||||||| Sbjct 378 TCTTCCCAGTAAGCGTCTTTACAAAGATCTGCAT 411 >seq101134 Length=8483 Score = 105 bits (116), Expect = 4e-18 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| ||| ||| ||||| ||||| ||||| | ||| | || |||| || Sbjct 7881 ACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGGCCATCCTCA 7940 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||||||||| || || | ||||||||| | || | ||||||||||| Sbjct 7941 AGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGG 8000 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| || || || ||||||| || | ||| || || | ||| ||||| Sbjct 8001 ATCTTAGCCTTCAC--AT--TATCGATGGTGTCTGAGCTCTCCACCTCCAAGGTGATGGT 8056 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || | ||||| ||||||||||||||| Sbjct 8057 CTTTCCGGTCAAGGTCTTGACAAAGATCTGCATA 8090 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| ||| ||| ||||| ||||| || || | | | | || |||| || Sbjct 8109 ACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAAGGTGCGGCCATCCTCA 8168 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| ||||| || || || |||||||| | || | ||||||||||| | Sbjct 8169 AGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGA 8228 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | || | || | ||| || || | ||| ||||| ||| Sbjct 8229 ATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGTGATGGTCTTT 8288 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| ||||||||||||||| Sbjct 8289 CCGGTCAAGGTCTTGACAAAGATCTGCATA 8318 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| ||| ||| ||||| ||||| || || | ||| | || |||| || Sbjct 8337 ACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATCCTCA 8396 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||||||||| || || || |||||||| | || | ||||||||||| | Sbjct 8397 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGA 8456 Query 34893 ATCTT 34897 ||||| Sbjct 8457 ATCTT 8461 >seq58370 Length=11695 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || ||| ||||| ||||| || || | ||| | || |||| Sbjct 2599 CAACACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCTGCAAGAGTGCGACCATC 2540 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || |||||||| || ||||| || || | ||||||||| | || | ||||||||||| Sbjct 2539 CTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTC 2480 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | || | ||| |||||| || | ||| || || Sbjct 2479 CTGAATCTTTGCCTTGACATTGTCAATTGTATCAGAACTCTCAACCTCCAAGGTGATTGT 2420 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| ||||| ||||| |||||||| ||||| Sbjct 2419 CTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 2387 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || ||| || || || || ||||| | ||| | || |||| || Sbjct 2367 ACCAGGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCAGCCAGGGTGCGGCCATCCTCA 2308 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || |||| ||||||||| | || | || || ||||| Sbjct 2307 AGCTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGG 2248 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| |||||| || | |||||||||||| Sbjct 2247 ATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTATGGTTTTC 2188 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || |||||||||||||||||||| |||||| Sbjct 2187 CCAGTGAGAGTCTTCACAAAGATTTGCATA 2158 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||| ||||| || ||| || ||||| || ||||| | |||| | || |||| || Sbjct 2140 AACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGCCCATCCTC 2081 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || ||||| || | | |||||| || | || | || |||||||| Sbjct 2080 AAGCTGCTTACCAGCAAAAATCAACCTTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTG 2021 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 || || |||||| || |||| || ||| | ||||| || | ||| |||| Sbjct 2020 GATTTTGGCTTTGAC--AT--TATCAATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGG 1965 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || ||||||||||| || ||||||||||| Sbjct 1964 TCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 1931 >seq80270 Length=12149 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||| ||||| || ||| || ||||| || ||||| | |||| | ||| |||| || Sbjct 803 AACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGTCCATCCTC 744 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || ||||| || | | |||||||||| | || | ||||||||||| Sbjct 743 AAGCTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTG 684 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| ||||| | || | ||| | ||||| |||| ||| || || || Sbjct 683 GATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCGAGGGTGATAGTCTT 624 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||||||||||||||| Sbjct 623 GCCTGTGAGGGTTTTCACAAAGATCTGCAT 594 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || ||| || || || || ||||| | ||| | || |||| || Sbjct 1030 ACCAGGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCAGCCAGGGTGCGGCCATCCTCA 971 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || |||| ||||||||| | || | || || ||||| Sbjct 970 AGCTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCTTCTTTGTCTTGG 911 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| |||||| || | |||||||||||| Sbjct 910 ATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTATGGTTTTC 851 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || |||||||||||||||||||| |||||| Sbjct 850 CCAGTGAGAGTCTTCACAAAGATTTGCATA 821 Score = 98.7 bits (108), Expect = 6e-16 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || |||||||| || || | || | || |||| || ||||| || || |||||| Sbjct 1696 TCCTTTTGAATGTTGTAATCTGCTAGAGTCCGACCATCTTCAAGCTGCTTACCAGCAAAT 1637 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||||||||||| |||||| ||| || || Sbjct 1636 ATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTCAC--AT 1579 Query 34911 GCTATCGATTC-ACCGGC---CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 |||| ||| | | | ||| || || | ||||||||| ||||| ||||| ||||| Sbjct 1578 --TATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCTT 1521 Query 34967 CACAAAGATCTGCAT 34981 ||||||||||||||| Sbjct 1520 CACAAAGATCTGCAT 1506 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| ||| || |||||||| ||||| | ||| ||| | | || || Sbjct 1259 AACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTC 1200 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || |||||| || ||||| || || | ||||| ||| | || | ||||||||||| Sbjct 1199 CAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTG 1140 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| ||| || | || | ||| | || || || | || || || || Sbjct 1139 GATCTTTGCTTTAACATTGTCAATTGTATCAGAGCTTTCCACCTCCAATGTGATTGTCTT 1080 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||||||||| ||||| Sbjct 1079 CCCAGTCAGGGTCTTCACAAAGATTTGCAT 1050 >seq67744 Length=10152 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || || |||| ||| || || |||||||| || || | ||| | || |||| || Sbjct 86 ACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGGCCATCCTCA 145 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || |||| ||||||||| | || | ||||| || || | Sbjct 146 AGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCTTTATCCTGA 205 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| |||||| || | |||||||||||| Sbjct 206 ATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTATGGTTTTC 265 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || |||||||||||||||||||| ||||| Sbjct 266 CCAGTGAGAGTCTTCACAAAGATTTGCAT 294 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || ||| || ||||| || ||||| | |||| | ||| ||| || Sbjct 314 ACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGTCCATTCTCG 373 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| ||||| || |||| |||||||||| | || | || ||||| || Sbjct 374 AGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGG 433 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || |||||| | || | ||| | ||||| || | ||| ||||| || Sbjct 434 ATTTTGGCTTTGACATTGTCAATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTTG 493 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||||||||| || ||||||||||| Sbjct 494 CCAGTGAGAGTCTTAACGAAGATCTGCAT 522 >seq48708 Length=2547 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || ||||| || Sbjct 280 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 221 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| |||||| Sbjct 220 ATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 161 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| ||| ||||| || ||||| || || ||||| Sbjct 160 TCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACG 101 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 100 AAGATCTGCAT 90 >seq76293 Length=4593 Score = 93.3 bits (102), Expect = 3e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || |||||||| || |||| || | | |||| || ||||| || || |||||| Sbjct 528 TCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGCTTACCAGCAAAT 469 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||||||| | || | || |||||||| |||||| ||| || || Sbjct 468 ATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTCAC--AT 411 Query 34911 GCTATCGATTC-ACCGGC---CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 |||| ||| | | | ||| || || | ||||||||| ||||| || || ||||| Sbjct 410 --TATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTAAGTGTCTT 353 Query 34967 CACAAAGATCTGCAT 34981 ||||||||||||||| Sbjct 352 CACAAAGATCTGCAT 338 >seq87988 Length=3988 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 34747 AATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTT 34804 |||||| ||||||||||||||||||| || | ||| | || ||||| || || || Sbjct 1603 AATCATAGTTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATT 1662 Query 34805 ATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTG 34864 ||| || | |||| |||| |||| |||| ||| || || ||||| || |||| ||||| Sbjct 1663 ATAATCTGCAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTG 1722 Query 34865 GTCTTGCGGCACCCCCTCCTTGTC 34888 ||| | || | || |||||||| Sbjct 1723 ATCTGGAGGGATGCCTTCCTTGTC 1746 >seq57720 Length=9334 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||||||||| || || | ||| | || | || || Sbjct 8046 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTACGACCGTCCTCG 7987 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || | | |||||||| | || | ||| ||||| || Sbjct 7986 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGG 7927 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 ||||| |||||| || |||| || | ||| || |||||| || | || ||||| Sbjct 7926 ATCTTGGCTTTGAC--AT--TATCAATGGTATCCGAGCTCTCAACCTCCAAAGTGATGGT 7871 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || | |||||||||||| |||||||| Sbjct 7870 CTTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 7838 >seq2078 Length=2300 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| | ||| | || |||| || ||||| || || ||||| Sbjct 2128 TCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAG 2069 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | || |||||||| |||||| |||||| Sbjct 2068 ATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTG 2009 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || || | ||| ||||| ||||| || | |||||| ||| Sbjct 2008 TCAATGGTGTCAGAGCTCTCGACCTCAAGGGTAATGGTCTTTCCAGTCAAAGTCTTGACA 1949 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 1948 AAGATCTGCATA 1937 >seq28101 Length=418 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||||||||| || || | ||| | | |||| || ||||| Sbjct 7 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCGAGCTG 66 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||||| || ||||| || | ||||||||| | || | |||||||| || |||||| Sbjct 67 CTTTCCAGCGAATATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGAATCTT 126 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 ||| || | |||| || ||| || || | |||||||| || || || Sbjct 127 GGCTTTCACATTGTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTCCCGGT 186 Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || ||||||||||||||| Sbjct 187 CAGAGTTTTGACAAAGATCTGCATA 211 >seq49026 Length=4188 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||| || || || || | ||| | || |||| || Sbjct 1203 ACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGGGTACGACCATCCTCG 1144 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || | | |||||||| | || | || ||||| || Sbjct 1143 AGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCCTGG 1084 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| ||| | ||| || || | ||| ||||| || Sbjct 1083 ATCTTGGCCTTGACGTTGTCAATCGTGTCAGAGCTCTCCACCTCCAGGGTAATGGTCTTC 1024 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | ||||||||||||||||||||| Sbjct 1023 CCTGTCAAAGTCTTCACAAAGATCTGCAT 995 >seq52026 Length=5667 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || || | ||| || ||||||| |||| | |||| || Sbjct 3494 ACCAAGTGAACAGTGGAATCCTTTTTAATATTGTAGTCCGTAAGGACAAGCCCATCCTCA 3435 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||| | || || | ||||||| | | || | || |||||||| Sbjct 3434 AGCTGCTTGCCAGCAGAAATCAGCCTTTGCTGGCCCAGGGGGATTCCTTCCTTGTCTTGG 3375 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || |||||| | || | ||| | ||||| || | | |||| | ||| Sbjct 3374 ATTTTGGCTTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCAAGGATTATAATCTTT 3315 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||||||||| ||||||||||||||| Sbjct 3314 CCGGTGAGAGTCTTGACAAAGATCTGCATA 3285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324167440556016