Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq112910 116 4e-21 >seq112910 Length=6904 Score = 116 bits (128), Expect = 4e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 84150 AACCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTG 84209 ||||| || || || || ||||||||||| ||||| ||||| | ||||||| |||||| Sbjct 4364 AACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAATTGTTA 4305 Query 84210 AAGGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAA 84269 || |||||| | |||||| | || || || || || ||||| || || |||||||| Sbjct 4304 AAACTAGCATATTAGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAG 4245 Query 84270 GTTTCCTCTTCTTGACCGAACTTGTAACC 84298 ||||| || |||||| |||| ||||||| Sbjct 4244 GTTTCTTCCTCTTGATCGAATCTGTAACC 4216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570432242523760