Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq112910 116 1e-21 >seq112910 Length=6904 Score = 116 bits (128), Expect = 1e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 5362 CATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACG 5421 || || ||| | ||| || | || || ||||||| ||| | |||||| |||||| ||| Sbjct 4374 CAAAGCGGTGAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACG 4315 Query 5422 GCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAAC 5481 ||||||||| |||||||| | |||||| | || ||||| || |||||||| || || Sbjct 4314 AGAATTGTTAAAACTAGCATATTAGAAGATCAATCGGCCAAAATAACCATGAGCGGCTAC 4255 Query 5482 AATGTTATACGTTTCTTCCTCTTGGCCGAATTTATATCC 5520 || ||||| |||||||||||||| ||||| | || || Sbjct 4254 GATATTATAGGTTTCTTCCTCTTGATCGAATCTGTAACC 4216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152436022411092