Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq112910 104 7e-18 >seq112910 Length=6904 Score = 104 bits (114), Expect = 7e-18 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 25645 ACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAGCTAGCATACTGG 25704 || ||||||||||| | |||||| |||||| ||| ||| ||||| |||||||| | | Sbjct 4349 ACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAATTGTTAAAACTAGCATATTAG 4290 Query 25705 AAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGG 25764 ||||| | || ||||| || |||||||| || || || ||||| || ||||| ||||| Sbjct 4289 AAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAGGTTTCTTCCTCTTGA 4230 Query 25765 CCGAATTTATATCCATAGTTCTGAGATTCA 25794 ||||| | || || | || ||||||| Sbjct 4229 TCGAATCTGTAACCTTCATTAACAGATTCA 4200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151780940244472