Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq112910 98.7 3e-16 >seq112910 Length=6904 Score = 98.7 bits (108), Expect = 3e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 18027 ACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAAGCTAGCATACTGG 18086 || ||||||||||| |||||||| |||| | | ||||||||| |||||||| | | Sbjct 4349 ACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAATTGTTAAAACTAGCATATTAG 4290 Query 18087 AAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGTCTCTTCTTCTTG 18145 ||||| | || ||||| || |||||||| || || |||||||| || ||||| ||||| Sbjct 4289 AAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAGGTTTCTTCCTCTTG 4231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151106684941268