Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq112910 129 2e-25 >seq112910 Length=6904 Score = 129 bits (142), Expect = 2e-25 Identities = 118/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 21648 AACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTA 21707 ||||| |||||||| |||||||| ||||| | ||||| || | | ||| ||||| ||| Sbjct 4364 AACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAATTGTTA 4305 Query 21708 AAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAA 21767 || |||||||||| |||||| | || |||||||| || ||||| || || ||||| || Sbjct 4304 AAACTAGCATATTAGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAG 4245 Query 21768 GTCTCTTCCTCTTGACCAAACTTGTAACC 21796 || |||||||||||| | || ||||||| Sbjct 4244 GTTTCTTCCTCTTGATCGAATCTGTAACC 4216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146003435087160