Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq58370 143 2e-29 seq67744 132 4e-26 seq2078 129 5e-25 seq101134 127 2e-24 seq80270 127 2e-24 seq28101 118 8e-22 seq76293 111 1e-19 seq57720 104 2e-17 seq66408 98.7 8e-16 seq87988 96.9 3e-15 seq115991 95.1 9e-15 >seq58370 Length=11695 Score = 143 bits (158), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || |||| ||||| || ||||| |||||||| || || || |||| |||||| ||| Sbjct 2142 AGAACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGCCCATCC 2083 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || || || |||||| | ||||| |||||||||||||| || || || || |||||| Sbjct 2082 TCAAGCTGCTTACCAGCAAAAATCAACCTTTGCTGATCCGGGGGGATGCCTTCCTTGTCT 2023 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||||||| | || | |||||||| ||| || ||||| || || || Sbjct 2022 TGGATTTTGGCTTTGACATTATCAATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTC 1963 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| | || || || || |||||||| Sbjct 1962 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 1931 Score = 138 bits (152), Expect = 9e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| |||||||| || || ||||| || |||||||| ||||| || ||| Sbjct 2841 CCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCA 2782 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || || || || || ||| | ||||| || ||||| || || ||| Sbjct 2781 AGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGA 2722 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| ||||| || |||||| | ||| ||| | || | |||||||| ||| || Sbjct 2721 ATACCCTCCTTGTCCTG-AATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCCAC 2663 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || |||||||| || | ||| || ||||| || ||||| Sbjct 2662 TTCCAAAGTGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 2615 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| ||||| || ||||| ||||| || || || || || | |||||| ||| Sbjct 2370 AGCACCAGGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCAGCCAGGGTGCGGCCATCC 2311 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || || || |||||| | || | ||| ||||| || || || ||||| ||||||||| Sbjct 2310 TCAAGCTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCTTCTTTGTCT 2251 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| || || | || | ||||||||| || || || | ||||| ||| Sbjct 2250 TGGATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTATGGTT 2191 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| | || || ||||| || ||||| Sbjct 2190 TTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 2159 >seq67744 Length=10152 Score = 132 bits (146), Expect = 4e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| |||||||| ||||| || ||||||||||| ||||| || | |||||| Sbjct 79 ACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGGCC 138 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | ||| ||||| || || || ||||||||||| Sbjct 139 ATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCTTT 198 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| |||| || || | || | ||||||||| || || || | |||| Sbjct 199 ATCCTG-AATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTA 257 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| ||||| | || || ||||| || ||||| Sbjct 258 TGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 294 >seq2078 Length=2300 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| ||||||||||| || || || || || || || || ||||| ||| Sbjct 1936 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCA 1877 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || ||||||||| | |||| | ||||| ||||| ||| Sbjct 1876 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 1817 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| ||||| || ||| || | || || | || | ||||||||| || || Sbjct 1816 ATACCCTCCTTGTCCTG-AATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCAC 1758 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| ||||| || | |||||| || || || ||||| Sbjct 1757 CTCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 1710 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| ||||||||||| || || || || || || || || || || || Sbjct 2164 CCACCACGCAGACGAAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCT 2105 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || |||||| | || | || ||||| || || ||| Sbjct 2104 AGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCAGGGGGA 2045 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || ||||| || ||| || | ||||| | || | |||||||| || || Sbjct 2044 ATGCCTTCCTTGTCCTG-AATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGAC 1986 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || || ||||| || || || ||||| |||||||| Sbjct 1985 CTCAAGGGTAATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 1938 >seq101134 Length=8483 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||||||||| |||||||| || || ||||| ||||| || | |||||| Sbjct 8102 ACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAAGGTGCGGCC 8161 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | |||| | ||||| ||||| ||||| ||||| || Sbjct 8162 ATCCTCAAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTT 8221 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | |||||| | || | ||||| || || || || | || | Sbjct 8222 GTCCTG-AATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGTGA 8280 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || ||||| || ||||| |||||||| Sbjct 8281 TGGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 8317 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||||||||| |||||||| || || ||||| || || || | ||| || Sbjct 7874 ACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGGCC 7933 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | || | || ||||| || || || |||||||| || Sbjct 7934 ATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTT 7993 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| | || | ||||| || || || || | || || Sbjct 7994 GTCCTGGATCTTAGCCTTCACATTATCGATGGTGTCTGAGCTCTCCACCTCCAAGGTGAT 8053 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| || ||||| |||||||| Sbjct 8054 GGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 8089 Score = 98.7 bits (108), Expect = 8e-16 Identities = 109/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||||||||| |||||||| || || ||||| ||||| || | |||||| Sbjct 8330 ACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCC 8389 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | |||| | ||||| ||||| ||||| ||||| || Sbjct 8390 ATCCTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTT 8449 Query 29691 GTCTTGTAATTTTTG-TTTGACA 29712 ||| || ||| || | |||||| Sbjct 8450 GTCCTG-AATCTTGGCCTTGACA 8471 >seq80270 Length=12149 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| || || || ||||||||||| ||||| || | || ||| ||| || || || Sbjct 1708 TGAAGGGTTGACTCCTTTTGAATGTTGTAATCTGCTAGAGTCCGACCATCTTCAAGCTGC 1649 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || |||||| |||| | || ||||| ||||| ||||| ||||| ||||| || ||| || Sbjct 1648 TTACCAGCAAATATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG-AATCTT 1590 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| ||| | || | || |||||| ||||| || | ||||| || || ||||| Sbjct 1589 TGCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGT 1530 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 | ||| || ||||| |||||||| Sbjct 1529 GAGGGTCTTCACAAAGATCTGCAT 1506 Score = 116 bits (128), Expect = 3e-21 Identities = 158/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || || || || || || ||||| ||||| || | || | | Sbjct 1493 ACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCCAGTGTCCTACC 1434 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || || ||| | || | || ||||| || || ||||| || ||||| Sbjct 1433 ATCCTCGAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTT 1374 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | |||||| | || | ||||| || ||| ||||| | ||| | Sbjct 1373 GTCCTG-AATCTTCGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAA 1315 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||||| || || || || || ||||| || |||||| Sbjct 1314 TAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 1277 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| ||||| || ||||| ||||| || || || || || | |||||| ||| Sbjct 1033 AGCACCAGGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCAGCCAGGGTGCGGCCATCC 974 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || || || |||||| | || | ||| ||||| || || || ||||| ||||||||| Sbjct 973 TCAAGCTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCTTCTTTGTCT 914 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| || || | || | ||||||||| || || || | ||||| ||| Sbjct 913 TGGATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTATGGTT 854 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| | || || ||||| || ||||| Sbjct 853 TTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 822 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | || ||| || ||||| || | || ||||| ||||||||||| || || || Sbjct 1277 TCCACCACGCAGACGGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCTGC 1218 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | || || | ||||| || ||| | || | || |||||||| || || Sbjct 1217 AAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGG 1158 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||| ||||| || | ||| ||| ||| | || | || ||||| ||| || Sbjct 1157 AATACCCTCCTTGTCCTGGATCTTTGCTTTAACATTGTCAATTGTATCAGAGCTTTCCAC 1098 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || | || || || || ||||| | ||| || ||||| || |||||| Sbjct 1097 CTCCAATGTGATTGTCTTCCCAGTCAGGGTCTTCACAAAGATTTGCATT 1049 >seq28101 Length=418 Score = 118 bits (130), Expect = 8e-22 Identities = 154/209 (74%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| |||||||| || || ||||| || |||||||| ||||| || ||| Sbjct 212 CCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCA 271 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || || || || || ||| | ||||| || ||||| || || ||| Sbjct 272 AGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGA 331 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| || || || |||||| | ||| ||| | || | |||||||| ||| || Sbjct 332 ATACCCTCCTTATCCTG-AATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCCAC 390 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGG 29767 ||| | ||| || |||||||| | ||||| Sbjct 391 TTCCAAAGTGATGGTTTTGCC-GGTAAGG 418 >seq76293 Length=4593 Score = 111 bits (122), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || || || ||||| |||||||| ||||| || | || | Sbjct 325 ACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCCAGTGTCCTGCC 266 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || || || ||| | || | || ||||| || || ||||| || ||||| Sbjct 265 GTCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTT 206 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| |||| |||||| | || | ||||| || ||| ||||| | ||| | Sbjct 205 GTCCTG-AATCTTTGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAA 147 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | ||||| || || || || || ||||| || |||||| Sbjct 146 TGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCATT 109 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| || || || ||||||||||| |||||||| | || | ||| || || || Sbjct 540 TGAAGGGTCGACTCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGC 481 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || |||||| |||| | || ||||| || || ||||| || || ||||| || ||| || Sbjct 480 TTACCAGCAAATATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTG-AATCTT 422 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| ||| | || | || |||||| ||||| || | ||||| || || ||||| Sbjct 421 TGCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGT 362 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| |||||||| Sbjct 361 AAGTGTCTTCACAAAGATCTGCAT 338 >seq57720 Length=9334 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||||||| || || || || || || || || |||||||||| ||| | ||| Sbjct 7821 AGCACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCAAGGGTCCTGCCATCC 7762 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||| || ||||| | ||||| || ||||||||||| || || || || || || Sbjct 7761 TCCAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCC 7702 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||||| | || | || ||||| || || || ||||| || || Sbjct 7701 TGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCTCTCGACCTCGAGAGTGATCGTC 7642 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || |||| |||||| || || |||||||| Sbjct 7641 TTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 7610 >seq66408 Length=4853 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | || || || ||||| || | || ||||| ||||||||||| || || || Sbjct 184 TCCACCACGCAGTCGGAGAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCTGC 243 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | || || | ||||| || ||| | || | || |||||||| || || Sbjct 244 AAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGG 303 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||| ||||| || | ||| |||||| | || | || || || ||| || Sbjct 304 AATACCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATTGTATCGGAGCTTTCCAC 363 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || || ||||| | || || ||||| ||||||||| Sbjct 364 CTCCAGGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTGCATT 412 >seq87988 Length=3988 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||||||||| | || ||| | || || || || |||||||| || |||||||| || Sbjct 1612 TCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAATCTGC 1671 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || ||| ||| ||| || | || || |||||| | |||| ||| |||||||| || || Sbjct 1672 AAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTGGAGG 1731 Query 29679 AATACCCTCTTTGTCTTGTAA 29699 || || || ||||| || || Sbjct 1732 GATGCCTTCCTTGTCCTGAAA 1752 >seq115991 Length=9835 Score = 95.1 bits (104), Expect = 9e-15 Identities = 145/204 (71%), Gaps = 7/204 (3%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || || || ||||| || || |||||||| || | || ||| ||| || | || Sbjct 6449 TGCAGGGTAGACTCTTTCTGGATATTATAATCGGCCAAAGTACGACCATCCTCCAACTGC 6390 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || ||| | ||||| || |||||||||| |||||||| || ||||| ||| || Sbjct 6389 TTTCCGGCAAAGATCAACCT-----GATCCGGCGGGATACCCTCCTTATCTTG-AATCTT 6336 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | ||||||| | || | || ||||| || || || | ||| || || |||||||| Sbjct 6335 GGCTTTGACATTGTCAATGGTATCAGAGCTCTCCACCTCCATAGTGATGGTCTTGCCAGT 6276 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 || | || ||||| |||||||| Sbjct 6275 CAAAGACTTCACAAAAATCTGCAT 6252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384666042322902