Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq62381 98.7 8e-16 >seq62381 Length=5639 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/231 (70%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 || ||||||||||| || |||| |||| || |||||||| || | || || | Sbjct 848 AATATGCAAATTTTCGTGAAAATTCTGACCGGGAAGACCATCACTATTGAGGTCGAGAGC 789 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 | ||| | | | | | || ||| || | |||||||||||| | || || ||| Sbjct 788 AGTGATACCATCGACAATGTCAAAGCCAAGACCCAGGACAAAGAAGGCATCCCTGTAGAT 729 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 ||||| || || || | ||| ||||| ||||| |||||| || |||| | ||| |||| Sbjct 728 CAACAGAGACTGATCTTTGCTGGCAAGCAATTGGAAGATGGTAGAACTCT-TGCGGTTAC 670 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||||| ||||| || || || || || | || |||||| || | |||||| Sbjct 669 AACATCCAAAAGGAGTCGACTCTTCACCTGGTGTTGAGGCTAAGGGGAGGA 619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401751872547776