Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq112910 132 6e-26 >seq112910 Length=6904 Score = 132 bits (146), Expect = 6e-26 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 179518 GGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTC 179577 ||||| | |||| ||||| ||||| |||||||| ||||| || || ||||| || || Sbjct 4216 GGTTACAGATTCGATCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTT 4275 Query 179578 GGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTT 179637 || || ||||||||| ||||||| |||||||| || || ||||| ||||||||| | Sbjct 4276 GGCCGATTGATCTTCTAATATGCTAGTTTTAACAATTCTCGTTCTTTACACTTCTTCTTA 4335 Query 179638 GCTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCT 179673 ||||| ||||| || || || ||||||||||| ||| Sbjct 4336 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCT 4371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 609430721823360