Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq58370 132 3e-26 seq76293 131 1e-25 seq101134 127 1e-24 seq80270 125 4e-24 seq66408 120 2e-22 seq28101 120 2e-22 seq102053 118 7e-22 seq57720 118 7e-22 seq2078 118 7e-22 seq67744 105 4e-18 seq49026 104 1e-17 seq48708 104 1e-17 >seq58370 Length=11695 Score = 132 bits (146), Expect = 3e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || |||||| |||||||||||| ||||| || | |||||| | Sbjct 2832 AGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCAAGTGTCCTT 2773 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || ||||| ||||| || || | ||| ||||| || || | |||||| Sbjct 2772 CCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCC 2713 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||| | ||| || || ||| ||||| ||| |||||||||| || Sbjct 2712 TTGTC-CTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCCACTTCCAAAGT 2654 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || ||||| ||||| | || || ||||| || |||||| Sbjct 2653 GATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCATG 2614 Score = 105 bits (116), Expect = 4e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || ||||| ||||| || ||||| ||||||| ||| || || Sbjct 2604 AGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCTGCAAGAGTGCGA 2545 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || ||||| || ||||| || | | ||| ||||| || || | |||||| Sbjct 2544 CCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCC 2485 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| |||| || || | |||||| || ||||| || |||| ||| Sbjct 2484 TTGTC-CTGAATCTTTGCCTTGACATTGTCAATTGTATCAGAACTCTCAACCTCCAAGGT 2426 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || ||||| | || || ||||| || |||||| Sbjct 2425 GATTGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCATG 2386 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||| |||||| |||||||| ||||||| ||| || | | | || || || || Sbjct 3045 TGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCGAGCTGC 2986 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || |||||||| | | || |||||||| || | ||||||||||| ||| || Sbjct 2985 TTTCCAGCAAATATGAGCCTTTGCTGGTCCGGAGGGATGCCCTCCTTGTC-CTGAATCTT 2927 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | ||| || | |||||| ||| ||||| || |||| ||||| || || || || Sbjct 2926 AGCTTTCACATTGTCAATTGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTTCCTGT 2867 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| || ||||| Sbjct 2866 CAAAGTTTTGACAAAGATTTGCAT 2843 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| || ||||| ||||||||||| || || || | ||| || ||| | || ||| Sbjct 2139 ACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGCCCATCCTCA 2080 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || ||||| ||||| || || | || || ||||| || | || ||||||||| | Sbjct 2079 AGCTGCTTACCAGCAAAAATCAACCTTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTGG 2020 Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 || ||| | ||| || || ||| ||||| ||| || || || | ||| || || || Sbjct 2019 AT-TTTGGCTTTGACATTATCAATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTT 1961 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | || || || || |||||||| Sbjct 1960 GCCAGTGAGAGTCTTGACGAAGATCTGCAT 1931 >seq76293 Length=4593 Score = 131 bits (144), Expect = 1e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||||||| ||||| ||| || |||||||| ||||||| ||||| | Sbjct 327 AGACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCCAGTGTCCTG 268 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || || ||||| || | | ||| ||||| || || | || || Sbjct 267 CCGTCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCT 208 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||||| | || || || |||||||||| ||| |||||||||| || Sbjct 207 TTGTCCTGAATCTTT-GCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGT 149 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| || || ||||||||||| ||||| Sbjct 148 AATGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCAT 110 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||||||||||||||| ||||| | || || | | | |||||||| || ||||| ||||| Sbjct 529 CTCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGCTTACCAGCAAA 470 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 ||| | | ||| ||||| || || | || |||||||| ||| |||| ||| || Sbjct 469 TATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTC-CTGAATCTTTGCTTTCACAT 411 Query 34635 TA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 || |||||| || ||||| || |||| |||||| || || || || | || |||| Sbjct 410 TATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTAAGTGTCTTCA 351 Query 34694 CAAAAATCTGCAT 34706 |||| |||||||| Sbjct 350 CAAAGATCTGCAT 338 >seq101134 Length=8483 Score = 127 bits (140), Expect = 1e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||||||| || ||| ||||| || ||||| ||||||| | || || Sbjct 8100 AGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAAGGTGCGG 8159 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || ||||| || | |||||| |||||||| || | ||||||| Sbjct 8160 CCATCCTCAAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCC 8219 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || || | ||| |||||| ||||||||| |||| ||| Sbjct 8220 TTGTC-CTGAATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGT 8278 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || || || ||||| |||||||| Sbjct 8279 GATGGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 8317 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||||||| || ||| ||||| || ||||| || |||| Sbjct 7863 CCACCACGAAGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCC 7922 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || || |||||||| || | | ||| ||||| || || Sbjct 7923 AGGGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGG 7982 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || || || |||||| ||||||||| Sbjct 7983 ATACCCTCCTTGTCCTGGATC-TTAGCCTTCACATTATCGATGGTGTCTGAGCTCTCCAC 8041 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || ||||| || || || ||||| |||||||| Sbjct 8042 CTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 8089 Score = 100 bits (110), Expect = 2e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||||||| || ||| ||||| || ||||| ||||||| || || || Sbjct 8328 AGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGG 8387 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || |||||||| || | |||||| |||||||| || | ||||||| Sbjct 8388 CCATCCTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCC 8447 Query 34609 TTGTC 34613 ||||| Sbjct 8448 TTGTC 8452 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || || || || |||| || || ||| | || || || || || |||||||| Sbjct 7670 CTCCTTCTGGATATTGTAGTCTGCGAGGGTACGCCCATCCTCGAGCTGCTTGCCGGCAAA 7729 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | | ||| ||||| || || | |||||||||||| ||| || | || || Sbjct 7730 GATAAGCCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCT-TGAATCTTGGCCTTCACAT 7788 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||| |||||| ||||||||| || | ||| || || || || || | || || | Sbjct 7789 TGTCAATGGTGTCTGAGCTCTCCACCTCAAGGGTGATGGTCTTCCCTGTAAGAGTCTTGA 7848 Query 34694 CAAAAATCTGCAT 34706 ||||||||||||| Sbjct 7849 CAAAAATCTGCAT 7861 >seq80270 Length=12149 Score = 125 bits (138), Expect = 4e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||||||||||||||| ||||||| || || || | |||||||| || ||||| ||||| Sbjct 1697 CTCCTTTTGAATGTTGTAATCTGCTAGAGTCCGACCATCTTCAAGCTGCTTACCAGCAAA 1638 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 ||| | | ||| |||||||| || | ||||||||||| ||| |||| ||| || Sbjct 1637 TATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTC-CTGAATCTTTGCTTTCACAT 1579 Query 34635 TA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 || |||||| || ||||| || |||| |||||| || || || || | || |||| Sbjct 1578 TATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCTTCA 1519 Query 34694 CAAAAATCTGCAT 34706 |||| |||||||| Sbjct 1518 CAAAGATCTGCAT 1506 Score = 104 bits (114), Expect = 1e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| || ||||| ||||||||||| || || || | ||| || || | || ||| Sbjct 802 ACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGTCCATCCTCA 743 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || ||||| ||||| || || | || ||||| || || | ||||||||||||| | Sbjct 742 AGCTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGG 683 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| |||| || || | ||| ||||| ||| || || || | ||| || || || Sbjct 682 ATC-TTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCGAGGGTGATAGTCTT 624 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | ||||||||||| ||||||||| Sbjct 623 GCCTGTGAGGGTTTTCACAAAGATCTGCATG 593 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 |||||||||||||| || |||| ||| |||| |||| || | |||||||| ||||| Sbjct 1240 TCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAG 1181 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | | ||| || || || || | ||||||||||| |||| |||| |||||| | Sbjct 1180 ATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATC-TTTGCTTTAACATT 1122 Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 |||||| || ||| ||||| |||| || || || || || || | || ||||| Sbjct 1121 GTCAATTGTATCAGAGCTTTCCACCTCCAATGTGATTGTCTTCCCAGTCAGGGTCTTCAC 1062 Query 34695 AAAAATCTGCAT 34706 ||| || ||||| Sbjct 1061 AAAGATTTGCAT 1050 >seq66408 Length=4853 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||||||| ||| || |||||||| || || | ||||| ||| | || || Sbjct 659 ACCAAGTGGAGAGTGGACTCTTTCTGAATGTTGTAGTCAGCGAGTGTACGCCCATCCTCG 718 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || || ||||| || | | ||||||||||| || | ||||||||||||| | Sbjct 719 AGCTGCTTGCCAGCAAAGATCAGCCTTTGTTGGTCCGGGGGAATTCCCTCCTTGTCTTGG 778 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| |||| ||| || | ||| ||||| ||| || || || | ||| || || || Sbjct 779 ATC-TTTGCTTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCGAGGGTGATGGTCTT 837 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | ||||||||||| |||||||| Sbjct 838 GCCTGTGAGGGTTTTCACAAAGATCTGCAT 867 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 |||||||||||||| || |||| ||| |||| |||| || | |||||||| ||||| Sbjct 221 TCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAG 280 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | | ||| || || || || | ||||||||||| |||| |||| || || | Sbjct 281 ATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATC-TTTGCCTTGACATT 339 Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 |||||| || ||| ||||| |||| ||| || || || || || | ||| || || Sbjct 340 GTCAATTGTATCGGAGCTTTCCACCTCCAGGGTGATTGTCTTCCCAGTAAGCGTCTTTAC 399 Query 34695 AAAAATCTGCAT 34706 ||| |||||||| Sbjct 400 AAAGATCTGCAT 411 Score = 86.0 bits (94), Expect = 4e-12 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 34524 AATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACG 34583 |||||| || |||| ||| |||| |||| || | |||||||| ||||| || | | Sbjct 1 AATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCT 60 Query 34584 CTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTG 34642 ||| || || || || | ||||||||||| ||| ||||| || || | ||||| Sbjct 61 CTGCTGATCTGGGGGGATACCCTCCTTGTCCTGGAT-TTTTGCCTTGACATTGTCAATTG 119 Query 34643 TGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCT 34702 | || ||| ||||| |||| ||| || || || || || | ||| || ||||| |||| Sbjct 120 TATCGGAGCTTTCCACCTCCAAGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCT 179 Query 34703 GCAT 34706 |||| Sbjct 180 GCAT 183 Score = 84.2 bits (92), Expect = 1e-11 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || ||||| |||||||| || || ||||| | ||| || || Sbjct 422 AGACGGAGCACCAGGTGAAGAGTAGATTCCTTTTGGATATTGTAATCAGCAAGGGTGCGG 481 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || ||||| ||||||||||| | | ||| || || || || | |||||| Sbjct 482 CCATCCTCTAGCTGTTTGCCGGCAAATATGAGCCTCTGCTGATCTGGGGGGATGCCCTCC 541 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| |||| || || || || || || ||||| || || | || Sbjct 542 TTGTCCTGGATC-TTTGCCTTGACATTATCGATCGTATCAGAACTCTCAACCTCTAATGT 600 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || || || | || || ||||| ||||||||| Sbjct 601 GATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCATG 640 >seq28101 Length=418 Score = 120 bits (132), Expect = 2e-22 Identities = 145/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || |||||| |||||||||||| ||||| |||| |||||| | Sbjct 221 AGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTT 280 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || ||||| ||||| || || | ||| ||||| || || | |||||| Sbjct 281 CCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCC 340 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || ||| ||| | ||| || || ||| ||||| ||| |||||||||| || Sbjct 341 TTATC-CTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCCACTTCCAAAGT 399 Query 34668 TATCGTTTTACCGGT 34682 || ||||| ||||| Sbjct 400 GATGGTTTTGCCGGT 414 >seq102053 Length=8183 Score = 118 bits (130), Expect = 7e-22 Identities = 168/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | || || | ||||| |||||||| |||||| || ||||| || || | Sbjct 4324 CGCCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 4383 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||||| || |||| || || ||||| ||||| || || | ||||| |||||||||| Sbjct 4384 CGAGTGTGCGGCCGTCCTCGAGCTGTTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 4443 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | |||||||||||| |||| || | || || | || ||||| | |||| Sbjct 4444 GGATGCCCTCCTTGTCTTGGATC-TTGGCCTTCACATTGTCGATGGTGTCGGAGGACTCC 4502 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || |||| || ||||| || || |||| |||||||| || |||||||| ||| Sbjct 4503 ACCTCCAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTG 4556 >seq57720 Length=9334 Score = 118 bits (130), Expect = 7e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 ||| ||||| | ||||| | ||||| || || ||| |||||| |||||||| ||||| Sbjct 8068 GTCACCGCCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 8009 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 | || || || |||| || || || || |||||||| || || | ||| |||||||| Sbjct 8008 AGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGG 7949 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCT 34654 || | || ||||| || |||||| | ||| || || ||| || || ||||| Sbjct 7948 TGGGATCCCTTCCTTATCCTGGATCTTG-GCTTTGACATTATCAATGGTATCCGAGCTCT 7890 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || |||| || || || || || || || || ||||||||||||||||| Sbjct 7889 CAACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 7838 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | ||||| |||||||| |||||| || ||||| || || | Sbjct 7608 CCACCCCTGAGACGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 7549 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| ||||| || || ||||| || |||| | ||| ||||| || || Sbjct 7548 AGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATTAGCCTCTGCTGGTCAGGAGGG 7489 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || ||| | || ||||| |||||| || Sbjct 7488 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGAC 7430 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | ||| || || || ||||||| |||||||| ||||| |||||| Sbjct 7429 CTCGAGGGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAAATTTGCATG 7381 >seq2078 Length=2300 Score = 118 bits (130), Expect = 7e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||||||||| || |||||| || || || ||||| | ||| ||||| Sbjct 1927 AGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCAAGGGTTCGG 1868 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || ||||| || | |||||| |||||||| || | |||||| Sbjct 1867 CCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCC 1808 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | |||||| | ||| ||||| |||||| || | ||| Sbjct 1807 TTGTC-CTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGT 1749 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | |||||||| ||||| ||||| Sbjct 1748 GATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 1710 Score = 91.5 bits (100), Expect = 9e-14 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||||||||| || |||||| || || || || |||| || || || Sbjct 2155 AGACGAAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGG 2096 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || ||||| || | | ||| ||||| || || | || ||| Sbjct 2095 CCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCC 2036 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || ||| | ||| ||||| |||||| || || | ||| Sbjct 2035 TTGTC-CTGAATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACCTCAAGGGT 1977 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || || || ||||| |||||||| Sbjct 1976 AATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 1938 >seq67744 Length=10152 Score = 105 bits (116), Expect = 4e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| ||||| || ||| ||||||||||||||| ||||| | || || || Sbjct 77 AGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGG 136 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || ||||| || | | ||| ||||| || || | ||||| Sbjct 137 CCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCT 196 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || ||| |||| || ||| | ||| ||||| ||||| || |||| ||| Sbjct 197 TTATC-CTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGT 255 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| ||||| || || | || |||||||| || |||||| Sbjct 256 TATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCATG 295 >seq49026 Length=4188 Score = 104 bits (114), Expect = 1e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | ||||| |||||||| |||||| || ||||| ||||| | Sbjct 765 CCACCCCTGAGACGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCC 706 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || |||| || || || || ||||| || || | | ||| ||||| || || Sbjct 705 AAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGGG 646 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || ||| | || ||||| ||||||||| Sbjct 645 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCAC 587 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | ||| || || || ||||| | |||||||| || ||||||||| Sbjct 586 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATG 538 >seq48708 Length=2547 Score = 104 bits (114), Expect = 1e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | || || | ||| | ||||||||| |||||| || ||||| || || | Sbjct 318 CGCCACCGCGGAGGCGGAGCACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 259 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || || || |||| || || || || ||||| || || | ||||| |||||||||| Sbjct 258 CGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 199 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | ||||||||||| |||| || | || ||| | || ||||| | |||| Sbjct 198 GGATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCC 140 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | ||| || || || || |||| |||||||| || ||||||||| Sbjct 139 ACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATG 89 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314277662260526