Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06]
215,024 sequences; 206,414,839 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq161123 127 2e-24
seq149362 123 2e-23
seq25063 122 7e-23
seq134381 113 4e-20
seq117806 113 4e-20
seq16096 113 4e-20
seq72254 107 2e-18
seq29583 107 2e-18
seq210190 104 2e-17
seq37850 98.7 8e-16
seq210616 96.9 3e-15
seq126729 95.1 1e-14
seq122442 95.1 1e-14
seq135156 86.0 5e-12
>seq161123
Length=4290
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || ||||| | ||| |||| ||||| || || |||||||||||||| |||||||
Sbjct 2550 TTCCACCACGCAGACGGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCCG 2609
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| || ||| ||||||||| |||||| || ||| | || || |||||||| || ||
Sbjct 2610 CAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGG 2669
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| ||||||| ||| || | | | | |||||| | |||
Sbjct 2670 GAATACCCTCCTTGTCCTGGATCTTTGCTTTAACATTGTCAATTGTATCAGAGCTTTCCA 2729
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| || || ||||| || || | || || ||||| |||||||||
Sbjct 2730 CCTCCAATGTGATTGTCTTCCCAGTAAGGGTCTTCACAAAGATTTGCATT 2779
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || || ||||||| || | |||||||| ||||||||||| ||||| ||
Sbjct 3008 CCACCACGGAGTCTAAGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCA 3067
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| || ||||||| ||||| ||||| ||| | || || || |||||||| |||
Sbjct 3068 AGTGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGG 3127
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| ||||||| || || | | | | ||| ||| | ||
Sbjct 3128 ATTCCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACC 3187
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| || |||||||| || | ||||| ||||| || |||||
Sbjct 3188 TCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 3234
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || || || | |||||||| || | |||||||| ||||| || || || || |
Sbjct 2778 TTCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTG 2837
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| || || || | ||||| ||||||||||| ||| | || || |||||||| || ||
Sbjct 2838 CGAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGG 2897
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||| |||||||| |||||| || || | ||| || ||| | |||
Sbjct 2898 GGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTCTCAA 2957
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || |||||||| || || | || |||||||| || |||||
Sbjct 2958 CCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 3006
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| ||||||||||||||||| || || || || || || | || || ||||| || ||
Sbjct 2126 GTTGACTCCTTTTGAATGTTGTAATCTGCTAGAGTCCGGCCATCTTCAAGCTGCTTACCA 2185
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || |||||||||||| || | ||| |||||||| |||||| ||||
Sbjct 2186 GCAAATATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTC 2245
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | |||||| ||| |||| ||| |||||||| || || | ||
Sbjct 2246 ACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTC 2305
Query 21159 TTGACAAATATTTGCAT 21175
|| ||||| || |||||
Sbjct 2306 TTCACAAAGATCTGCAT 2322
Score = 93.3 bits (102), Expect = 4e-14
Identities = 163/237 (69%), Gaps = 18/237 (8%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| ||||| ||| |||||||| || ||||| || || |||
Sbjct 2324 CCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCC 2383
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | ||||| ||||| || || ||| | || || ||||||||||| |||
Sbjct 2384 AGTGTCCTACCATCCTCGAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 2443
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCA-------CCGGG 21121
| |||||| ||||| || |||| ||| |||| ||||| | | |
Sbjct 2444 ATGCCTTCTTTGTC------CTGAATTTTCGCCT---TGACATTATCAATTGTGTCTGAG 2494
Query 21122 C--TCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
| ||| ||||| ||||| || || || || || || || ||||| |||||||||
Sbjct 2495 CTTTCCACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 2551
>seq149362
Length=6446
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| ||||| ||| ||||| || |||||||| || || |||
Sbjct 2426 CCACCACGTAGACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCC 2367
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | ||||||| ||||| || || ||| |||| || ||||||||||| |||
Sbjct 2366 AGTGTCCTGCCGTCCTCAAGCTGCTTTCCTGCAAAAATGAGCCTCTGCTGGTCTGGGGGA 2307
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||| ||||| |||||| || || | | | || || | ||| |
Sbjct 2306 ATGCCTTCTTTGTCCTGAATCTTTGCCTTGACGTTATCAATTGTGTCTGAGCTTTCCACT 2247
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| |||||||| || ||||| || || || ||||| |||||||||
Sbjct 2246 TCCAAAGTAATGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCATT 2199
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || ||||| |||| ||| | ||||||||| ||||| ||||| ||||| ||
Sbjct 1514 CCACCACGGAGTCTGAGAACCAAATGGAGAGTGGACTCTTTTTGGATGTTGTAGTCAGCG 1455
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | ||||| ||||| ||||| ||| | || || || || |||||| |||
Sbjct 1454 AGTGTCCGCCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGTTGGTCCGGGGGA 1395
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| ||||||| ||| || | | | | ||| ||| | ||
Sbjct 1394 ATTCCCTCCTTGTCTTGGATCTTTGCTTTGACATTGTCAATAGTGTCAGAGCTTTCAACC 1335
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| ||||||||||| || | ||||| ||||| || |||||
Sbjct 1334 TCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 1288
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || ||||| | ||| |||| ||||| || || |||||||||||||| ||||| |
Sbjct 1972 TTCCACCACGCAGTCGGAGAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCTG 1913
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| || ||| ||||||||| |||||| || ||| | || || |||||||| || ||
Sbjct 1912 CAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGG 1853
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| |||||| || || | | | | ||||| | |||
Sbjct 1852 GAATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATTGTATCGGAGCTTTCCA 1793
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| ||| || ||||| || || | ||| || ||||| || ||||||
Sbjct 1792 CCTCCAGGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTGCATT 1743
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || ||||| | ||| |||| ||||| || || |||||||||||||| ||||| |
Sbjct 2200 TTCCACCACGCAGACGGAGAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCTG 2141
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| || ||| |||| |||| |||||| || ||| | || || |||||||| || ||
Sbjct 2140 CAAGAGTTCTTCCGTCTTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGG 2081
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| ||| ||| || || | | | | |||||| | |||
Sbjct 2080 GGATACCCTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATTGTATCAGAGCTTTCCA 2021
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| ||| || ||||| || || | ||| || ||||| || ||||||
Sbjct 2020 CCTCCAAGGTGATTGTCTTCCCTGTAAGCGTCTTTACAAAGATCTGCATT 1971
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || || || | |||||||| || | ||| ||||||||||| || ||||| || |
Sbjct 1744 TTCCACCACGTAGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTATAATCGG 1685
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| ||||| || | ||||| ||||||||||| ||| | || || |||||||| || ||
Sbjct 1684 CAAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGG 1625
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||| |||||||| ||||||| || || | | | |||||| |||
Sbjct 1624 GTATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCAA 1565
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || |||||||| || || | || || ||||| || |||||
Sbjct 1564 CCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 1516
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| ||||||||||||||||| || |||||||| || | || || ||||| || ||
Sbjct 2624 GTCGACTCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGCTTACCA 2565
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || ||||||||||| || | |||||||||||| |||||| ||||
Sbjct 2564 GCAAATATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTC 2505
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | |||||| ||| |||| ||| |||||||| || || | ||
Sbjct 2504 ACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTAAGTGTC 2445
Query 21159 TTGACAAATATTTGCAT 21175
|| ||||| || |||||
Sbjct 2444 TTCACAAAGATCTGCAT 2428
>seq25063
Length=710
Score = 122 bits (134), Expect = 7e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| ||| | ||||| ||||| || ||||| ||||| |||||||| || | |||
Sbjct 157 AGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGGCCATCC 216
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||| || || ||| | ||||| ||||||||||| || | || ||||||||
Sbjct 217 TCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCC 276
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| ||||| | | | | || || | |||| |||| ||| ||||||
Sbjct 277 TGGATCTTAGCCTTCACATTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGTGATGGTC 336
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| ||||| || || |||||||| || |||||
Sbjct 337 TTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 368
>seq134381
Length=6558
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || ||||||||||| | || | ||| |||||||| || || || ||||| ||
Sbjct 4108 CCACCACGAAGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCTGCG 4167
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||| ||||| || || ||| | || || ||||| ||||| ||
Sbjct 4168 AGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGGTCTGGAGGG 4227
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| ||| | | | ||| || || | |||
Sbjct 4228 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGATGTTGTCGATGGTGTCGGAGTTCTCTACC 4287
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||||||||||| || || ||||| || |||||
Sbjct 4288 TCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTTACAAAGATCTGCAT 4334
>seq117806
Length=5035
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||| | || | ||| |||||||| || ||||| ||||| ||
Sbjct 3691 CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 3632
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || ||||||| ||||| ||||| || | || || | |||||||||| ||
Sbjct 3631 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 3572
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| |||||| || || | | ||| || || || ||||
Sbjct 3571 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 3512
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||| || |||| ||||| || || || |||||
Sbjct 3511 TCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 3465
>seq16096
Length=889
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||||||| |||| |||||||||||||||||| |||||||| ||
Sbjct 593 CCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCA 534
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | ||||| ||||| || || ||| |||| | ||||||||||| |||
Sbjct 533 AGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGA 474
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || ||||| || || || |||||| | | | || ||| | ||| |
Sbjct 473 ATACCCTCCTTATCCTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCCACT 414
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || ||||| |||||||| | || |||||||| ||||||||
Sbjct 413 TCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 367
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | ||| | |||||||||||||||||||| || || |||| ||| || | |||
Sbjct 122 AGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAAGGTGCGGCCATCC 63
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTC 21061
|| ||||| || || ||| | || ||||||||||||||
Sbjct 62 TCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTC 25
>seq72254
Length=390
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||||||| ||| | || |||||||| || || || || || ||
Sbjct 52 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCA 111
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| || | ||||| ||||| ||||| ||| | || || | |||||||||| |||
Sbjct 112 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 171
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| ||||| || || | | | | || ||| | ||||
Sbjct 172 ATTCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACC 231
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| || ||||||||||| | ||||| || || ||||||||
Sbjct 232 TCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 278
>seq29583
Length=650
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || |||||||||| || | ||| || ||||||||||| || ||||| ||
Sbjct 490 CCACCGCGGAGTCTGAGCACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCAGCA 431
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | ||||| ||||| || || ||| |||| ||||| |||||||| |||
Sbjct 430 AGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGA 371
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||| || ||| || ||| || | | ||| || ||| | ||
Sbjct 370 ATGCCTTCCTTATCTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGCTTTCAACC 311
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| ||||||||||| || | || || || || || |||||
Sbjct 310 TCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 264
>seq210190
Length=6381
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || |||||||| | || | ||| |||||||| || || || ||||| ||
Sbjct 2986 CCACCACGAAGTCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCAGCG 2927
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | ||||||| ||||| || || ||| | || || ||||| || || ||
Sbjct 2926 AGGGTCCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGGG 2867
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| ||| || | | ||| || || | ||||
Sbjct 2866 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACC 2807
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| | |||||||||||||| || || ||||| || |||||
Sbjct 2806 TCGAGGGTGACGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 2760
>seq37850
Length=568
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| ||| | ||||||||||| || || || || || |||
Sbjct 335 CCACCGCGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCC 394
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| || | ||||||| ||| || || || | || | |||||||||||| |||
Sbjct 395 AAAGTTCGGCCATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGA 454
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| || || | | | | |||||| | |||
Sbjct 455 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCTCTCGACC 514
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || || ||||| ||||||| |||||||| || || |||||
Sbjct 515 TCGAGAGTGATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 561
>seq210616
Length=3554
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct 3345 CCACCGCGCAGACGAAGCACCAAGTGCAAAGTGGACTCCTTTTGAATATTATAGTCAGCA 3404
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | |||| ||||| || | ||| |||| | ||||||||||| |||
Sbjct 3405 AGTGTCCTTCCATCCTTAAGCTGCTTATCTGCAAAAATCAACCTCTGCTGGTCTTGGGGA 3464
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| || || |||||| | | | || ||| | ||| |
Sbjct 3465 ATGCCCTCCTTGTCTTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCCACT 3524
Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151
|||| || ||||| ||||||||
Sbjct 3525 TCCAAAGTGATGGTTTTGCCGGT 3547
>seq126729
Length=3148
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| |||||||| || |||||||| || || || || || | ||||||| ||| |||||
Sbjct 749 GTAGACTCCTTCTGGATGTTATAATCTGCGAGAGTGCGGCCATCCTCCAACTGCTTGCCG 690
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| | || || ||||||||||| ||| | ||| |||||||| || ||| ||
Sbjct 689 GCGAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGACCTTGGCCTTG 630
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || || |||| || | ||| ||||||||||| |||| |||
Sbjct 629 ACGTTGTCGATGGTGTCGGAACTCTCCACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTT 570
Query 21159 TTGACAAATATTTGCAT 21175
|| || ||||| |||||
Sbjct 569 TTCACGAATATCTGCAT 553
>seq122442
Length=1060
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | ||||||||||| || || || || || |||
Sbjct 279 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCC 338
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | ||||| ||||| || || ||| | || | |||||||||||| ||
Sbjct 339 AGGGTGCGACCATCCTCGAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGG 398
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||| || |||||| ||| || | ||| ||||| ||||
Sbjct 399 ATACCTTCCTTATCCTGGATCTTGGCTTTGACATTATCGATGGTATCCGAACTCTCCACC 458
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || |||||||| ||||| || || || ||||| || |||||
Sbjct 459 TCCAAAGTGATGGTCTTTCCGGTCAAAGTCTTCACAAAGATCTGCAT 505
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || ||||||||||||| |||| || |||||||| || || || || |||||
Sbjct 507 CCACCACGAAGCCTGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAATCCGCA 566
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | ||||||| || || || || | || | |||||||| ||| ||
Sbjct 567 AGAGTCCTGCCATCCTCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGG 626
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||| || |||||| || || | ||| ||||| | |||
Sbjct 627 ATCCCTTCCTTATCCTGGATCTTGGCCTTGACGTTATCGATTGTATCGGAGCTCTCAACC 686
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| |||||||||||| || || || || || || || || |||||
Sbjct 687 TCCAGGGTAATGGTCTTCCCTGTCAAAGTCTTCACGAAAATCTGCAT 733
>seq135156
Length=1536
Score = 86.0 bits (94), Expect = 5e-12
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || ||||||| ||| |||| ||||| || || |||||||||||||| || || |
Sbjct 1096 TTCCTCCACGCAGCCGGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAATCTG 1155
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTC 21061
| || ||| | ||||||| |||||| || ||| | || || |||||||| ||
Sbjct 1156 CAAGAGTTCTTCCATCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATC 1210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421152625429184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |