Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_002730.1 Length=38297 Score E Sequences producing significant alignments: (Bits) Value seq14600 84.2 5e-12 >seq14600 Length=930 Score = 84.2 bits (92), Expect = 5e-12 Identities = 220/334 (66%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 5168 AACATTCCCATTGGGGATTTAACAGTGTCTGCACCGTTGTTTTTTGTGGTGAAAAAGAAC 5227 ||||| ||||| |||| || ||||| | |||||||| ||| |||| | | | Sbjct 907 AACATGCCCATCGGGGCCTTTGTGGTGTCCGACCCGTTGTTGCGGGTGCTGAATAGGTGC 848 Query 5228 TGGTCATCACGGGTAAGGGTGCGAAGAACTATAGTAAACATGCCTTCGACAGTGATTTTC 5287 || | |||| | | | |||||| || || || | ||||||||| | ||||| ||| Sbjct 847 TGTCCGTCACTGACTACAGAGCGAAGGACGATGGTGACCATGCCTTCCAAGGTGATCTTC 788 Query 5288 TCGTCCAGCATTTTGCCGATAGTTTTCATTTTCACGCGCCCCATAGGGGTTTCTTCGGTG 5347 ||||||||||| |||||||| || ||||| || | | || || || ||||| Sbjct 787 TCGTCCAGCATCTTGCCGATGGTCTTCATCTTGATCTGGCCGGCGTCCGTCTCCTCGGTA 728 Query 5348 TGTGCAAGAAAATAGACTCTCAGGTCATCAGGTGCATCCTGTGCA--GCCTTAATCACCT 5405 || || | ||||| | | || || | ||| ||| ||| || | | | | Sbjct 727 TGGCTGAGGATGTAGACGCGAACATCGTCTG--GCAGGCTGAGCAGTGCTTCGAAAATGT 670 Query 5406 CCCATGCGTGGCGGCCTATCTCAGTAAATTTATCAAACGATTTTTCTTCTGAGCGGCGCA 5465 ||| | ||| ||||| || || || || || || ||| ||| || || ||||||| Sbjct 669 TCCAGGTGTGCCGGCCGATTTCGGTGAACTTGTCGAACCCTTTCTCCTCGCTCCGGCGCA 610 Query 5466 TAAACTCATTGCTCATCACATACTGGAAGTCATC 5499 | ||||| ||| || | ||||||||||| || Sbjct 609 TGAACTCGTTGGCCAGGATGTACTGGAAGTCGTC 576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122116189077792