Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_005056.1 Length=32684 Score E Sequences producing significant alignments: (Bits) Value seq115971 82.4 2e-11 >seq115971 Length=1990 Score = 82.4 bits (90), Expect = 2e-11 Identities = 164/242 (68%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 11545 TTCATCCACTGTCATAAAGGCACTATCGGCGCAATCCGGCGTGTGGTGGAGCCGCTCGGC 11604 ||| ||||| || || ||||| |||||||| | || || |||||||| || || ||| Sbjct 747 TTCGTCCACGCCCACAAGGGCACCATCGGCGCCCTGCGCCGGGTGGTGGAACCCCTGGGC 688 Query 11605 TATCTCATTAACGTGACGGAGTGGTGGGAAAACAGT--GACCCGC----CAGGCACCTTC 11658 || || || ||| ||||||||| | | || |||| || | ||||||||| Sbjct 687 TACCTGATCCGCGTCCACGAGTGGTGGCAGGAGAGCCCGACCGGCACTCCGGGCACCTTC 628 Query 11659 CGGCTTGATATTGGTGTACTGGAAAGCGGTATCACAGAGGCAATGTATCAGGAAATGGAA 11718 || || || | || || || || ||||| ||||| ||| | ||||| | | ||| | Sbjct 627 CGCCTGGACGTCGGCGTGCTCGACAGCGGCATCACCGAGACCATGTACGACGCCATGAAC 568 Query 11719 CGGCTGATTGCTGATGCCAAACCTGCAAGCCGCCACCTTATTGGCCTGAACATTACCCGG 11778 | |||||| | || ||| || | |||| ||||| | |||||| ||| | || | Sbjct 567 CTGCTGATCGACGACGCCCGCCCGGTCGGCCGGCACCTGGTCGGCCTGGCCATCAGCCTG 508 Query 11779 GA 11780 || Sbjct 507 GA 506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104200452406848