Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_008717.1 Length=36415 Score E Sequences producing significant alignments: (Bits) Value seq7292 167 5e-37 >seq7292 Length=1256 Score = 167 bits (184), Expect = 5e-37 Identities = 371/551 (67%), Gaps = 12/551 (2%) Strand=Plus/Plus Query 16555 GCCGATCTGCGGGCCATCTTCGCCCTGCGGCCGGCCGCCGCTATCGAGTATCTGGAGCGC 16614 |||||||| || ||||||| |||| || |||||||| |||| || || || || Sbjct 303 GCCGATCTCAAAGCGATCTTCGGCCTGGATCCAGCCGCCGCCATCGCCTACCTCAAGGGC 362 Query 16615 AAGGGCTTCGCGATCACTTGGAACTGGCATGACGTTGACGCGGCCACCCACGCCCGCGCT 16674 || |||| ||| | || ||| | ||||| ||| | || || |||||| || || Sbjct 363 AAAGGCTATGCGGTTACCTGGGATTGGCAGGACATGCTCGATGCGGCCCACGACCAAGCG 422 Query 16675 CTGACCGTTGCCAGAGCAGCACGCCTGGACGTGCTCCAGGACATTCGCGACGCCCTGGTC 16734 | |||||||||| || |||||||| ||||| |||||| ||||| | ||| Sbjct 423 TTCACCGTTGCCAAGGCCATGCGCCTGGATCTGCTCTCGGACATCCGCGAATCATTGGA- 481 Query 16735 GAGAACC-TGGAGCGCGGCGAGACGCTACGAGATTTCAAGCGCAACCTGCGGCCGACCCT 16793 ||| || || || ||| |||| || | | |||| | |||| ||| ||| Sbjct 482 GAGCGCCCTGCAGGAAGGCAAGACCCTGCAGCAGTTCACCAAGGAACTGCAGCCTGTCCT 541 Query 16794 GGAGGCGAAGGGCTGGTGGGGTCGCCAGGTGGTAGTCGC--GCCGGATGGCGGCGCCGAG 16851 |||| | || |||||||| ||||| | |||| ||| | ||| || ||| Sbjct 542 GGAGCAACAAGGTTGGTGGGGCAAGCAGGTCCTGGTCGACAGCCAG--GGCAATGCGGAG 599 Query 16852 GTCGCACAACTGGGCAGCCCGCGCCGCCTGGATACCATCTACCAGACCAACATGCAGGCG 16911 | | || ||||| ||||| ||||| || | || ||||||||||||||| ||||| Sbjct 600 ATGGTCCAGCTGGGTAGCCCACGCCGGCTTAAGACGATCTACCAGACCAACCTGCAGAGC 659 Query 16912 GCCTACATGGCAGGGCGCTACGCGGCCGCCTACGAAGCCAGGG---AAACCCACCCTTAC 16968 ||||| ||||| || ||| | | |||| || | || || | ||||| || ||| Sbjct 660 GCCTATATGGCCGGTCGCAAATC---CGCCATGGAGGACACGGTCGAGACCCATCCGTAC 716 Query 16969 TGGATGTATGTGGCGGTGATGGATGGCGTTACCCGGCCCAGCCATGCCGCCCTGCATGGG 17028 |||| || | ||||||||||||||| ||||| || |||||||| || || | || Sbjct 717 TGGAGCTACATCGCGGTGATGGATGGCAAGACCCGACCTAGCCATGCTGCGCTCAACGGT 776 Query 17029 AAAGTGTTCAGGTGGGACGATCCGATCTGGCAGCACATCACCCCGCCCAATGGCTACAAC 17088 |||| | | ||||| ||||||||| |||| ||||||||| || | ||| Sbjct 777 GTGGTGTACCGACATGACGACCCGATCTGGTCCACCATCTTCCCGCCCAACGGGTTTAAC 836 Query 17089 TGCCGGTGCCG 17099 ||||| ||||| Sbjct 837 TGCCGCTGCCG 847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116109166734176