Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_009235.2 Length=48674 Score E Sequences producing significant alignments: (Bits) Value seq21788 93.3 1e-14 >seq21788 Length=766 Score = 93.3 bits (102), Expect = 1e-14 Identities = 120/163 (74%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 20176 CGCCGTTCGTCGTGCAGGGCGGGCAGGTGTTCTTGCGTCAGGCGCTGATCGGTGCGGGCT 20235 ||||||||| || |||||||||||||||||| || | |||| | ||| | ||| Sbjct 562 CGCCGTTCGCAGTTCAGGGCGGGCAGGTGTTCATGAATGAGGCCTTCATCCAAGACGGCA 621 Query 20236 GGATTACGAACGCGATGATCGGCAGCTACATCCAGTCCGA-CAACTACATCGCGGGGCGG 20294 ||||||||||| | ||| ||||||||||| ||| ||| ||||||| |||| || | Sbjct 622 CCATTACGAACGCCAAGATAGGCAGCTACAT-CAGCTCGACCAACTACGTCGCCGGCCAA 680 Query 20295 CAGGGATGGCGGTTGGATAAGACCGGTTGGTTCGAAATGAACG 20337 || || ||| ||| | |||| ||| |||||| || |||| Sbjct 681 CAAGGCTGGATCTTGAACAAGAGCGGCACGTTCGAGATCAACG 723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155237799523968