Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq117806 134 3e-26 seq29583 134 3e-26 seq37850 127 5e-24 seq122442 122 2e-22 seq211369 118 2e-21 seq25063 116 9e-21 seq134381 114 3e-20 seq161123 113 1e-19 seq149362 113 1e-19 seq126729 107 5e-18 seq16096 102 2e-16 seq210190 100 7e-16 seq72254 95.1 3e-14 >seq117806 Length=5035 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| || | || || || ||||| || ||||||||| Sbjct 3691 CCACCGCGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 3632 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 3631 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 3572 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || || ||||| || || | ||| || || || Sbjct 3571 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 3512 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || || || || ||||| |||||||| Sbjct 3511 TCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 3465 >seq29583 Length=650 Score = 134 bits (148), Expect = 3e-26 Identities = 175/238 (74%), Gaps = 13/238 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||||||||| || || || |||| || ||| ||||| ||||| |||| Sbjct 494 CATG-CCACCGCGGAGTCTGAGCACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGT 436 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || |||||||| || || | || ||||| || || ||||| | || || | Sbjct 435 CAGCAAGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTG---GT 379 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 ||||| || ||||| ||||| |||||||| ||||| || || || || | || || Sbjct 378 CTGGGGGAATGCCTTCCTTATCTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGC 319 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| || || || ||||| ||||| || || |||||||| ||||| |||||||| Sbjct 318 T---TTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 264 >seq37850 Length=568 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || || || || | ||| | || || || |||||||| || || || Sbjct 107 CCACCACGAAGCCTGAGCACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCA 166 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || || || ||||| || || |||||||||| | ||| ||| |||| Sbjct 167 AGAGTCCTGCCATCCTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCCGGTGGG 226 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || || || ||||| || || | || |||| || Sbjct 227 ATCCCTTCCTTATCCTGGATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTC---TCA 283 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||||||||| |||||||| ||||| || ||||| Sbjct 284 ACTTCGAGAGTGATTGTCTTCCCGGTGAGAGTCTTCACGAAGATTTGCAT 333 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || | ||| | ||| || || |||||||| || ||||| Sbjct 335 CCACCGCGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCC 394 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || || || || || |||||||||| | ||| || || ||| Sbjct 395 AAAGTTCGGCCATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGG---TCCGGG 451 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||| || || |||||||| || || || ||||| || || | ||| |||| Sbjct 452 GGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCTC--- 508 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||||||||||||||| || || |||||||| |||||||| Sbjct 509 TCGACCTCGAGAGTGATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 561 >seq122442 Length=1060 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| || || || || || | || || || ||||| ||||| |||||| Sbjct 543 TCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCCTCCAATTGCTTTCCAGCGAAG 602 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| ||| |||||| ||||| ||||||||||| || || || ||||| Sbjct 603 ATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTGACGTTA 662 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| |||| || || || || || || |||||||| |||| |||||| Sbjct 663 TCGATTGTATCGGAGCTC---TCAACCTCCAGGGTAATGGTCTTCCCTGTCAAAGTCTTC 719 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 720 ACGAAAATCTGCAT 733 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | |||| ||| || || |||||||| || || || Sbjct 279 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCC 338 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || ||||| ||||||| | ||| || |||| Sbjct 339 AGGGTGCGACCATCCTCGAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGG 398 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCT 288423 || ||||| ||||||||||| || ||||| || || || || | ||| ||| || Sbjct 399 ATACCTTCCTTATCCTGGATCTTGGCTTTGACATTATCGATGGTATC---CGAACTCTCC 455 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| ||||||| |||||| || || |||||||| Sbjct 456 ACCTCCAAAGTGATGGTCTTTCCGGTCAAAGTCTTCACAAAGATCTGCAT 505 Score = 109 bits (120), Expect = 1e-18 Identities = 144/197 (73%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| || ||||| || || | ||||| || || || || || || ||| Sbjct 771 TCCTTCTGGATATTGTAATCGGCCAGGGTCCTGCCGTCCTCCAACTGCTTACCGGCAAAG 830 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | ||| ||| || ||| ||||| || ||||||||||| || || || ||| Sbjct 831 ATCAATCTCTGCTGA---TCCGGGGGAATTCCCTCCTTATCCTGGATCTTAGCCTTGACG 887 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || |||| || || ||||| ||||| ||||||||||| || ||| Sbjct 888 TTGTCAATCGTGTCGGAGCTC---TCAACCTCGAGAGTGATGGTCTTCCCGGTAAGGGTC 944 Query 288457 TTGACGAATATCTGCAT 288473 || || || |||||||| Sbjct 945 TTCACAAAGATCTGCAT 961 >seq211369 Length=926 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||||||||| || || ||| ||| || ||| |||| ||||| ||||| | Sbjct 572 CCACCGCGGAGTCTGAGAACCAGAAGAAGAGTCGATTCCTTTTAAATATTGTAGTCACCA 513 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| || || | || || || || || ||||| | ||||| | ||| Sbjct 512 AGGGTGCGTCCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTTTGTTGGTATGGGGGG 453 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || | |||||||| ||||| || || || || | || ||| ||| Sbjct 452 ATGCCTTCCTTGTTTTGGATTTTGGCTTTGACATTATCAATGGTGTCAGAGCT---TTCA 396 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || ||||||||||| || |||||||| Sbjct 395 ACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 346 >seq25063 Length=710 Score = 116 bits (128), Expect = 9e-21 Identities = 167/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | ||||| ||| ||| || ||||| || || || || Sbjct 370 CCACCACGGAGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCC 429 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || ||||| || |||||||||||||| || || ||| Sbjct 430 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTG---GTCCGGG 486 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||| || || ||||| || || || || || || || || | || |||| Sbjct 487 GGAATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTC--- 543 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || |||| ||||||||||| |||||||| Sbjct 544 TCGACCTCAAGGGTGATGGTCTTTCCCGTCAAGGTCTTGACGAAGATCTGCAT 596 >seq134381 Length=6558 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| ||||| ||||||||||| ||||| Sbjct 3880 CCACCACGGAGACGCAGAACAAGGTGCAGAGTGGACTCTTTCTGGATATTATAATCGGCC 3939 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || || || ||||| |||||||||| | || ||| ||| Sbjct 3940 AAAGTACGACCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGCGGG 3999 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || ||||| || || || ||||| || || || || | ||| |||| ||| Sbjct 4000 ATACCCTCCTTATCTTGAATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTC---TCT 4056 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || |||| |||||| || || | |||||| Sbjct 4057 ACCTCGAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAAACCTGCAT 4106 >seq161123 Length=4290 Score = 113 bits (124), Expect = 1e-19 Identities = 167/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || || || | ||| |||||||||||||| || || || Sbjct 2779 TCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGC 2838 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 |||||| || || || |||| ||||| || || ||||| || | ||| || |||| Sbjct 2839 GAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTG---ATCTGG 2895 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 ||||| || || || ||||| || || || || || || || || | || |||| Sbjct 2896 GGGGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTC-- 2953 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| || ||||||||||| || |||||||| Sbjct 2954 -TCAACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 3006 Score = 107 bits (118), Expect = 5e-18 Identities = 169/238 (71%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||||||||| || || || | ||| |||||||| || || |||| Sbjct 3004 CATG-CCACCACGGAGTCTAAGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGT 3062 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || ||||| || | || || || || |||||||| | || || | Sbjct 3063 CAGCAAGTGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTG---GT 3119 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 || |||||||| || || || ||||| || || || || || || |||| || || Sbjct 3120 CTGGGGGGATTCCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGC 3179 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| || ||||| ||||| ||||| || || || || || || || |||||||| Sbjct 3180 T---TTCAACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 3234 >seq149362 Length=6446 Score = 113 bits (124), Expect = 1e-19 Identities = 170/238 (71%), Gaps = 13/238 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| |||||||| || || | ||| | ||| ||||||||||| || |||| Sbjct 1518 CATG-CCACCACGGAGTCTGAGAACCAAATGGAGAGTGGACTCTTTTTGGATGTTGTAGT 1460 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||||| || || || || || | || || || || |||||||| | ||||| | Sbjct 1459 CAGCGAGTGTCCGCCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGTTG---GT 1403 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 | ||| ||||| || || || ||||| || ||||| || || || |||| || || Sbjct 1402 CCGGGGGAATTCCCTCCTTGTCTTGGATCTTTGCTTTGACATTGTCAATAGTGTCAGAGC 1343 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| || ||||| ||||| ||||| || || || || || || || |||||||| Sbjct 1342 T---TTCAACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 1288 Score = 113 bits (124), Expect = 1e-19 Identities = 167/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || || |||| || || |||||||||||||| ||||| Sbjct 1743 TCCACCACGTAGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTATAATCGGC 1684 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || || |||| ||||| || || ||||| || | ||| || |||||| Sbjct 1683 AAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTG---ATCTGG 1627 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 | || || || || |||||||| || || || || || || || | ||| ||| Sbjct 1626 GGGTATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCAATTGTATCAGAACTC-- 1569 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| || |||||||| || || |||||||| Sbjct 1568 -TCAACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 1516 Score = 113 bits (124), Expect = 1e-19 Identities = 146/199 (73%), Gaps = 12/199 (6%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || ||||| || || || | ||||||||| || ||||| ||||| || Sbjct 2163 TTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCTTCCAACTGTTTACCTGCAAA 2104 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| || | ||| ||| |||||| || || || || ||||||||||| || || || Sbjct 2103 GATGAGCCTCTGCTGA---TCTGGGGGGATACCCTCCTTGTCCTGGATTTTTGCCTTGAC 2047 Query 288399 GTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455 || || || | ||| ||| ||| || || | ||||| |||||||| || || || Sbjct 2046 ATTGTCAATTGTATCAGAGCT---TTCCACCTCCAAGGTGATTGTCTTCCCTGTAAGCGT 1990 Query 288456 CTTGACGAATATCTGCATT 288474 ||| || || ||||||||| Sbjct 1989 CTTTACAAAGATCTGCATT 1971 >seq126729 Length=3148 Score = 107 bits (118), Expect = 5e-18 Identities = 165/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || | || || || ||||| ||||| || ||| Sbjct 779 CCACCACGGAGACGAAGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTATAATCTGCG 720 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || |||||||| || | ||| || |||||| Sbjct 719 AGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGCCTCTGCTGG---TCTGGG 663 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || || || ||||||| || || || ||||| || || | ||| ||| Sbjct 662 GGGATGCCCTCCTTGTCCTGGACCTTGGCCTTGACGTTGTCGATGGTGTCGGAACTC--- 606 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || || || || || |||||||||||||| Sbjct 605 TCCACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTTTTCACGAATATCTGCAT 553 >seq16096 Length=889 Score = 102 bits (112), Expect = 2e-16 Identities = 164/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | || | ||| || ||||| ||||||||||| || Sbjct 593 CCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCA 534 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | || || ||||| || |||| | ||| || |||||| Sbjct 533 AGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTG---GTCTGGG 477 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || |||||||| ||||| |||||||| || || || | || ||| | Sbjct 476 GGAATACCCTCCTTATCCTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---T 420 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| | ||||| || || ||||| || |||||||| || || ||||| Sbjct 419 TCCACTTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 367 >seq210190 Length=6381 Score = 100 bits (110), Expect = 7e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || | || || || ||||||||||| ||||| Sbjct 3214 CCACCACGGAGACGAAGAACAAGGTGCAGGGTAGACTCCTTCTGGATATTATAATCGGCC 3155 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || || || ||||| |||||||||| | || ||| ||| Sbjct 3154 AAAGTACGACCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGCGGG 3095 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || ||||| || | || ||||| || || || || | ||| |||| || Sbjct 3094 ATACCCTCCTTATCTTGAACCTTGGCTTTGACATTGTCAATGGTATCAGAGCTC---TCC 3038 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || |||| |||||| || || |||||||| Sbjct 3037 ACCTCCAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAAATCTGCAT 2988 >seq72254 Length=390 Score = 95.1 bits (104), Expect = 3e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | ||| | || || || |||||||| || || || Sbjct 52 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCA 111 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || |||||||||||||| || ||| Sbjct 112 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 171 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || ||||| || || || || ||||| || || | || || || || Sbjct 172 ATTCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACC 231 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || || || ||||| || ||||| Sbjct 232 TCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176404458026272