Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06]
215,024 sequences; 206,414,839 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq149362 154 1e-32
seq25063 127 2e-24
seq161123 120 3e-22
seq72254 118 1e-21
seq16096 109 5e-19
seq117806 107 2e-18
seq211369 104 2e-17
seq210616 98.7 1e-15
seq122442 95.1 1e-14
seq210190 93.3 4e-14
>seq149362
Length=6446
Score = 154 bits (170), Expect = 1e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | ||| | ||||| ||||| ||||||||||||||||| | || | ||||
Sbjct 2411 AGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCCAGTGTCCTGCCGTCC 2352
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| || ||| ||||||||| ||||||||| || ||||| |||||||| ||
Sbjct 2351 TCAAGCTGCTTTCCTGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCC 2292
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| ||| || || | ||| || | |||||||| | ||| | |||
Sbjct 2291 TGAATCTTTGCCTTGACGTTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAATGGTT 2232
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| ||||||||||| || || ||||||||||||
Sbjct 2231 TTCCCGGTCAAAGTCTTCACAAAAATTTGCATT 2199
Score = 127 bits (140), Expect = 2e-24
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| ||||| || ||||||||||||||||| || | || | | | ||
Sbjct 2640 AAGGACAAGGTGAAGGGTCGACTCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATC 2581
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||||||||| || ||| | ||||||| ||||||||| |||||||| ||||| || ||
Sbjct 2580 TTCAAGCTGCTTACCAGCAAATATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTC 2521
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
|| | | |||||||| ||| || | ||||||| || || || | |||| ||
Sbjct 2520 CTG-AATCTTTGCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGG 2462
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || || | || || || || || |||||
Sbjct 2461 TCTTTCCAGTAAGTGTCTTCACAAAGATCTGCAT 2428
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || || | ||| || || | ||| | || || |||||||| |||||||| || |||
Sbjct 1514 CCACCACGGAGTCTGAGAACCAAATGGAGAGTGGACTCTTTTTGGATGTTGTAGTCAGCG 1455
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || ||| | || |||||||||||||| ||| | || |||| || ||||| || |||
Sbjct 1454 AGTGTCCGCCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGTTGGTCCGGGGGA 1395
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||| || || ||||| | | |||||||| ||| || | || ||| | || ||
Sbjct 1394 ATTCCCTCCTTGTCTTGGA-TCTTTGCTTTGACATTGTCAATAGTGTCAGAGCTTTCAAC 1336
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | ||||||||| || | ||||| || || || |||||
Sbjct 1335 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 1288
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| |||||||||||||| ||||| | || | ||||||| | ||| || ||
Sbjct 2168 GTAGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCTTCCAACTGTTTACCT 2109
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||||| |||||| || || || || || || || || || |||||| |||
Sbjct 2108 GCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCCTGGATTTTTGCCTTG 2049
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | ||||||| | ||||| || | || | ||||| || || | ||
Sbjct 2048 ACATTGTCAATTGTATCAGAGCTTTCCACCTCCAAGGTGATTGTCTTCCCTGTAAGCGTC 1989
Query 64427 TTTACGAAAATTTGCATT 64444
||||| || || ||||||
Sbjct 1988 TTTACAAAGATCTGCATT 1971
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| |||||||||||||| ||||| | || | |||| || | ||| || ||
Sbjct 1940 GTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCT 1881
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||||| |||||| || || ||||| || || || || || || || |||
Sbjct 1880 GCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTTCGCCTTG 1821
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | |||||| | ||||| || | || | ||||| || || | ||
Sbjct 1820 ACATTGTCAATTGTATCGGAGCTTTCCACCTCCAGGGTGATTGTCTTCCCAGTAAGCGTC 1761
Query 64427 TTTACGAAAATTTGCATT 64444
||||| || || ||||||
Sbjct 1760 TTTACAAAGATCTGCATT 1743
>seq25063
Length=710
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| | ||||| || ||||| || || |||||||||||||| | |||||| | ||
Sbjct 384 AAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATC 443
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||||| |||||| | || || ||||||||||| || |||||||| || || ||
Sbjct 444 CTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 503
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| ||| || | || ||| | || || || | || | |||
Sbjct 504 CTGAATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCGACCTCAAGGGTGATGGT 563
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| || ||||| || || ||||| || |||||
Sbjct 564 CTTTCCCGTCAAGGTCTTGACGAAGATCTGCAT 596
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| | ||||| || ||||| || || |||||||| ||||| | ||| || | ||
Sbjct 156 AAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGGCCATC 215
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||||| |||||| | || |||| ||||||||| || || || || || || ||
Sbjct 216 CTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTC 275
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| ||| || | || || | ||||| || | || | |||
Sbjct 276 CTGGATCTTAGCCTTCACATTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGTGATGGT 335
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| |||||||| || || || || || |||||
Sbjct 336 CTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 368
Score = 89.7 bits (98), Expect = 5e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | |||||| | ||| | ||||| || || || || ||||| |||||
Sbjct 597 ACCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAGTCTGC 656
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTC 64329
| |||||| | || ||||||||||| |||||| | ||||||| |||||||||
Sbjct 657 TAGGGTGCGGCCATCCTCAAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTC 710
>seq161123
Length=4290
Score = 120 bits (132), Expect = 3e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || |||||||||||||||||||| | || || | |||
Sbjct 2111 AGGACGAGGTGAAGGGTTGACTCCTTTTGAATGTTGTAATCTGCTAGAGTCCGGCCATCT 2170
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| || ||| | ||||||| ||||||||| |||||||| || || || ||
Sbjct 2171 TCAAGCTGCTTACCAGCAAATATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 2230
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | |||||||| ||| || | ||||||| || || || | |||| |||
Sbjct 2231 TG-AATCTTTGCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGT 2289
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| || || | || || || || || |||||
Sbjct 2290 CTTTCCAGTGAGGGTCTTCACAAAGATCTGCAT 2322
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | ||| | || || || || || |||||||||||||| | || | | ||
Sbjct 2339 AGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCCAGTGTCCTACCATCC 2398
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| || ||| | ||||||| ||||||||| || ||||| |||||||| ||
Sbjct 2399 TCGAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCC 2458
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| ||||| ||| ||| || | ||| || | |||||||| | ||| | ||
Sbjct 2459 TGAATTTTCGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAATAGTT 2518
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| || |||||||| || || || |||||||||
Sbjct 2519 TTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 2551
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || || | ||||||||| || || | || || ||||||||||||||||| || ||
Sbjct 3008 CCACCACGGAGTCTAAGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCA 3067
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || || |||| || ||||||||||| ||| | || |||| |||||||| || ||
Sbjct 3068 AGTGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGG 3127
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
||||| || || ||||| || ||| ||| ||| || | || ||| | || ||
Sbjct 3128 ATTCCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACC 3187
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| || | ||||| || || || |||||
Sbjct 3188 TCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 3234
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || |||||||| || ||||||||||||| || || | ||
Sbjct 2795 AGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGCGAGCGTACGGCCATCC 2854
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| ||||||||| | ||||||| |||||| || || || || || || || ||
Sbjct 2855 TCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTTGTCC 2914
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| ||| ||| || | ||| ||| | || || || | || | ||||
Sbjct 2915 TGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTCTCAACCTCCAATGTGATGGTC 2974
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || || | ||| || || || || |||||
Sbjct 2975 TTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 3006
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| |||||||||||||| || || | || | |||| || | ||| || ||
Sbjct 2582 GTTGATTCCTTTTGAATGTTGTAGTCCGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCT 2641
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||||| |||||| || || ||||| || || || || || | | ||||||||
Sbjct 2642 GCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGA-TCTTTGCTTT 2700
Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425
||| || | ||||||| | ||||| || | || | ||||| || || | ||
Sbjct 2701 AACATTGTCAATTGTATCAGAGCTTTCCACCTCCAATGTGATTGTCTTCCCAGTAAGGGT 2760
Query 64426 TTTTACGAAAATTTGCATT 64444
|| || || |||||||||
Sbjct 2761 CTTCACAAAGATTTGCATT 2779
>seq72254
Length=390
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | |||||| | ||| | ||||| || || || || |||||||| ||
Sbjct 51 ACCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCAGC 110
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || | || |||||||||||||| ||| | || || ||||||||||| || ||
Sbjct 111 AAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGG 170
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||| || || || || || || ||| || || | || ||| | |||||
Sbjct 171 GATTCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCAC 230
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | ||||||||||| | ||||| ||||||||||||||
Sbjct 231 CTCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 278
>seq16096
Length=889
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | |||||| | || | || || || |||||||| || || |||||
Sbjct 594 ACCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGC 535
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | || ||||||||||| || ||| |||| | || ||||||||| || ||
Sbjct 534 AAGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGG 475
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
||| || || || || || | |||| ||||| ||| || | || ||| | ||||
Sbjct 474 AATACCCTCCTTATCCTG-AATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCCA 416
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| | ||| | ||| |||||||| | || || || || ||||||||
Sbjct 415 CTTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 367
Score = 105 bits (116), Expect = 7e-18
Identities = 97/123 (79%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||||| ||||| || || || ||||||||||||||||| || | |||||| | ||
Sbjct 123 AAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAAGGTGCGGCCATC 64
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||||| || ||| | ||||| | ||||||||| || || || || ||||| ||
Sbjct 63 CTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 4
Query 64351 TTG 64353
||
Sbjct 3 CTG 1
Score = 100 bits (110), Expect = 3e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| || || || || ||||||||||||||||| | || | | | ||
Sbjct 807 AAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATC 748
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||||| || || | ||||||| ||||||||| || || || || || || ||
Sbjct 747 CTCAAGCTGCTTTCCAGCGAATATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 688
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
|| | | || ||||| ||| || | ||||| || || || | |||| ||
Sbjct 687 CTG-AATCTTGGCTTTCACATTGTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGG 629
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || |||| |||||| || || || |||||
Sbjct 628 TCTTCCCTGTCAGAGTTTTGACAAAGATCTGCAT 595
>seq117806
Length=5035
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | ||||| || || || |||||||| || |||| ||||| ||||
Sbjct 3676 AGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCC 3617
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||||||||| | ||||| ||||||||||| || || || ||||| || ||
Sbjct 3616 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCC 3557
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || || ||||| || | || | ||||
Sbjct 3556 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTC 3497
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || || | ||||| ||||| || |||||
Sbjct 3496 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 3465
>seq211369
Length=926
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | ||| || || ||| ||| |||||||| |||| ||| ||||| || |
Sbjct 573 ACCACCGCGGAGTCTGAGAACCAGAAGAAGAGTCGATTCCTTTTAAATATTGTAGTCACC 514
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || ||||||||||| || ||| |||| |||| || |||| || ||
Sbjct 513 AAGGGTGCGTCCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTTTGTTGGTATGGGGG 454
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
|| ||||| || | ||| | |||| ||||| ||| || | || ||| | || |
Sbjct 453 GATGCCTTCCTTGTTTTGGA-TTTTGGCTTTGACATTATCAATGGTGTCAGAGCTTTCAA 395
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || | || | ||||||||| || | ||| || || || || |||||
Sbjct 394 CCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 346
>seq210616
Length=3554
Score = 98.7 bits (108), Expect = 1e-15
Identities = 148/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 64237 TAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAG 64296
||| |||| || || || || | ||||||||||||||| | || | | | || || ||
Sbjct 3137 TAGGTGAAGGGTGGACTCCTTCTAAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCGAG 3196
Query 64297 CTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTAT 64356
|||||| || || | ||||||| |||| ||| ||||| || || || || || || |
Sbjct 3197 CTGCTTTCCAGCGAATATGAGCCTTTGCTTGTCCGGAGGGATGCCCTCCTTGTCATG-AA 3255
Query 64357 TTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGC 64415
| || ||||| ||| || | |||||| || || || | |||| |||||| |
Sbjct 3256 TCTTAGCTTTCACATTGTCAATTGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTTC 3315
Query 64416 CGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| ||||||||||| || || ||||||||
Sbjct 3316 CTGTCAAAGTTTTGACAAAGATTTGCAT 3343
>seq122442
Length=1060
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || || || || |||||||| || | |||||| | || || ||||||
Sbjct 303 TGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGGGTGCGACCATCCTCGAGCTGC 362
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || ||| | || | || ||||||||| || || || ||||| || || || || ||
Sbjct 363 TTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCCTGGATCTTG 422
Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419
||||| ||| || | ||||| ||||| || | ||| | |||||| |||||
Sbjct 423 -GCTTTGACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGTGATGGTCTTTCCGGT 481
Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443
|||||| || || || || |||||
Sbjct 482 CAAAGTCTTCACAAAGATCTGCAT 505
>seq210190
Length=6381
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || || | ||| ||||| || || | ||||| || || || || ||||| || |||
Sbjct 2986 CCACCACGAAGTCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCAGCG 2927
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||| | |||| || |||||||| |||||| | ||||||| ||| || || |||||
Sbjct 2926 AGGGTCCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGGG 2867
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||||| || || | || || | |||||
Sbjct 2866 ATGCCCTCCTTGTCCTGGATCTTG-GCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCAC 2808
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || |||||||||||||| | || || || || || |||||
Sbjct 2807 CTCGAGGGTGACGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 2760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 498301854706560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |