Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq25629 89.7 1e-13 >seq25629 Length=702 Score = 89.7 bits (98), Expect = 1e-13 Identities = 186/272 (68%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 26631 GTAGCGATCGAACGCCCGTTCGAGCTTCACGTCGTACAGGTTCTCTGCGTAAGCCTCGCC 26690 |||||| |||| || || | ||||| | |||||| || || ||||| ||| ||| Sbjct 525 GTAGCGGGCGAAGGCGCGCGCCAGCTTGATGTCGTAGAGATTGCGGGCGTA-GCCGGGCC 467 Query 26691 -GTTGTACAGCTCGGCGAACTTCGCCCACTTCCGGCCACGCAG-CGCGGCGAGTAGCGCC 26748 |||||| |||||| | |||||| || | | ||||| | | || || ||||| Sbjct 466 CGTTGTAGCCACGGGCGAAGTCCGCCCATTTGCCTGCGCGCAGGCTCTGC-AGCAGCGCG 408 Query 26749 TTGTCGCCGAGGATGAAGCGCACGAACGCCTCGAGCTGCTCAGCTTCGCTGATCTTCATC 26808 | | || | | |||||||||||| ||||| || ||| | || ||| | || ||||| Sbjct 407 GGTTGGGCGTGCAGGAAGCGCACGAAGGCCTCCAGGTGCGCGGCCGCGCCGCTCGTCATC 348 Query 26809 GCGTCGACGAACGCGAACACGTCCGGGTAGCCGAGCGCGTTCCAGTGAAAGCCCATGATC 26868 | | ||||| | | || | |||| | || | | |||||| ||||||||||| Sbjct 347 CGGGCAACGAAGTCCTGGATATCGGCGTAGTCCAGGGTCTGCCAGTGGTAGCCCATGATC 288 Query 26869 TGGAACGCGCCCCAGCTCGCGGCCTCGAGCGC 26900 |||||| ||||||||| || | ||| || || Sbjct 287 TGGAACAGGCCCCAGCTGGCCGACTCCAGGGC 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118729658415424