Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq115931 104 4e-17 >seq115931 Length=8006 Score = 104 bits (114), Expect = 4e-17 Identities = 132/177 (75%), Gaps = 6/177 (3%) Strand=Plus/Minus Query 22968 TTCGCACTCTTCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGAT 23027 ||| || |||||||| ||||||||||| ||||| || ||| || || ||||| || Sbjct 6330 TTCACAGACTTCATCACTTTCAAAGAACAACATTTGCGCCACACCCTCACCTGCGTAAAT 6271 Query 23028 CAGTGCCGG--GCTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAG-CCTTTCCATTC 23084 |||| || | || ||| ||||| |||||||| || |||| || | |||| ||| || Sbjct 6270 TCGTGCAGGAAGATT--TGTTGTATTTGAAAACTCAAGTGTAA-CGTGACCTTCCCACTC 6214 Query 23085 TGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTGCC 23141 || || | ||||| |||||||| || || |||||||||||||| || || || || Sbjct 6213 AGGCTCTAAAGGCGTTACGTTTACAATAATACCGCAACGCGCATAAGTTGACTTACC 6157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895181047921920