Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_017984.1 Length=46387 Score E Sequences producing significant alignments: (Bits) Value seq105100 104 7e-18 >seq105100 Length=315 Score = 104 bits (114), Expect = 7e-18 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 32120 CAGAATCAATTTGATGCTCTAGTGTCACTGACCTACAACATCGGCTCAGGTGCTTTTAAA 32179 || |||||||| ||||| | || || | | || |||||||| | |||||||||| Sbjct 309 CAAAATCAATTCGATGCATTGGTTTCTTTAGCTTATAACATCGGGACTAATGCTTTTAAA 250 Query 32180 AATTCAACTTTACTCAAGCTTCTTAACAATGGCGATTATCAAGGTGCTGCCGATCAATTC 32239 | ||||||||| | ||| ||| || | |||||| ||| ||| || |||||||| Sbjct 249 ACGTCAACTTTAGTGAAGTATCTGAATGCTTTAGATTATAAAGCTGCAGCGGATCAATTT 190 Query 32240 CCAGCATGGAAAAAAGCTGGTGGTCGAGTTCTTGAAGGTTTAGTTAAGCGCCGTGCTGCT 32299 | | |||||| ||||| || ||| | || | ||||||| ||| ||||||| || Sbjct 189 CTGGTATGGAATAAAGCGGGCGGTAGTGTGTTGAAAGGTTTGGTTCGCCGCCGTGAAGCA 130 Query 32300 GAAAGAAGTTTATTTCTAAAGAAGTAA 32326 || ||| |||||| ||||||| ||| Sbjct 129 GAGAGAGCATTATTTTTAAAGAAATAA 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147938086399712