Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_020202.1 Length=37740 Score E Sequences producing significant alignments: (Bits) Value seq7292 168 2e-37 >seq7292 Length=1256 Score = 168 bits (186), Expect = 2e-37 Identities = 373/552 (68%), Gaps = 12/552 (2%) Strand=Plus/Plus Query 16547 GGCCGATCTGCGGGCCATCTTCGCCATGCGGCCGGAGGCCGCCATCGAGTACCTGGAGCG 16606 ||||||||| || ||||||| | || || | |||||||||| ||||| || | Sbjct 302 GGCCGATCTCAAAGCGATCTTCGGCCTGGATCCAGCCGCCGCCATCGCCTACCTCAAGGG 361 Query 16607 CAAGGGCTTCTCGATCACCTGGAACTGGCACGATGTTGACGCAGCCACCCATGCCCGAGC 16666 ||| |||| || | |||||| | ||||| || | || || |||| | || ||| Sbjct 362 CAAAGGCTATGCGGTTACCTGGGATTGGCAGGACATGCTCGATGCGGCCCACGACCAAGC 421 Query 16667 GCTGACGGTGGCCAAGGCGGCACGCCTGGACGTGCTCCAGAACATCCGCGACGCCCTGGT 16726 | | || || |||||||| |||||||| ||||| | |||||||||| | ||| Sbjct 422 GTTCACCGTTGCCAAGGCCATGCGCCTGGATCTGCTCTCGGACATCCGCGAATCATTGGA 481 Query 16727 CGATAACCTGGAGCGTGGAGGAACGCTGCGCGACTTC-CAGCGCAACCTGCGGCCGATCC 16785 |||| || || || |||| | ||| | | ||| ||| ||| ||| Sbjct 482 GAGCGCCCTGCAGGAAGGCAAGACCCTGCAGCAGTTCACCAAGGAAC-TGCAGCCTGTCC 540 Query 16786 TGGAGGCCAAGGGCTGGTGGGGACGTCAGATAGTGGTTGC--GCCGGACGGCGGGGCCGA 16843 ||||| | || |||||||| ||| | |||| | ||| | ||| || || Sbjct 541 TGGAGCAACAAGGTTGGTGGGGCAAGCAGGTCCTGGTCGACAGCCAG--GGCAATGCGGA 598 Query 16844 GGTCGCCCAGCTCGGCAGCCCGCGCCGGCTGGAAACGATCTACCAGACCAACATGCAGTC 16903 | | | |||||| || ||||| |||||||| | |||||||||||||||||| ||||| Sbjct 599 GATGGTCCAGCTGGGTAGCCCACGCCGGCTTAAGACGATCTACCAGACCAACCTGCAGAG 658 Query 16904 GGCCTACATGGCCGGGCGCTATGCCGCCGCATACGAGGCCAGG---GAAACTCACCCTTA 16960 ||||| |||||||| ||| | |||| ||| |||| || | || || || || || Sbjct 659 CGCCTATATGGCCGGTCGCAAATCCGC--CAT-GGAGGACACGGTCGAGACCCATCCGTA 715 Query 16961 CTGGATGTATGTGGCCGTCATGGACAGCGTCACCCGGCCCAGCCATGCGGCGCTACATGG 17020 ||||| || | || || ||||| || ||||| || |||||||| ||||| | || Sbjct 716 CTGGAGCTACATCGCGGTGATGGATGGCAAGACCCGACCTAGCCATGCTGCGCTCAACGG 775 Query 17021 CAAGGTGTTCCGCTGGGACGACCCGATCTGGCAGCACATCATGCCGCCGAATGGCTACAA 17080 ||||| ||| ||||||||||||||| |||| | ||||| || || | || Sbjct 776 TGTGGTGTACCGACATGACGACCCGATCTGGTCCACCATCTTCCCGCCCAACGGGTTTAA 835 Query 17081 CTGCCGGTGCCG 17092 |||||| ||||| Sbjct 836 CTGCCGCTGCCG 847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120338340275776