Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_022915.1 Length=40471 Score E Sequences producing significant alignments: (Bits) Value seq136675 86.0 2e-12 >seq136675 Length=3717 Score = 86.0 bits (94), Expect = 2e-12 Identities = 144/206 (70%), Gaps = 12/206 (6%) Strand=Plus/Plus Query 1495 TGGCCAGATGGCGGGAATAGCGTCGAGGCCGGCATCTGGG--AAATGCAGGAGCGAATGC 1552 |||||||| || || |||| ||||||||| |||| ||||| | ||||| ||| Sbjct 843 TGGCCAGAGGGTGGCGTAGGCGTGGAGGCCGGC--CTGGTCCAAATGTACGAGCGCATGA 900 Query 1553 TCACCGGCCGGTGGAGAGTTTTCTCCAACCTAGTTGAGTGGTTT----GAAGAGAAGCGC 1608 ||| || || |||| || ||| | |||| |||||||| ||||||||| Sbjct 901 CCACTGGACGATGGAAGGTGTTCAGCCACCTC----AGTGGTTTCTTCGAAGAGAAGATG 956 Query 1609 CTCTATCACCGGGATGAGAATGGCCGGATCGTGAAAGAGCGCGATGATTTGCTTTCCGCC 1668 || ||||| || ||||| ||||||||||| || |||| || | || |||| Sbjct 957 AATTACCACCGCGACGAGAAAGGCCGGATCGTCAAGCTTGGCGACGACATCCTGGCCGCT 1016 Query 1669 TCGCGATATGCCTACATGATGCGCCG 1694 || || || ||||||||||||||||| Sbjct 1017 TCCCGGTACGCCTACATGATGCGCCG 1042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129055225515104