Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_024330.1 Length=37380 Score E Sequences producing significant alignments: (Bits) Value seq7292 172 1e-38 >seq7292 Length=1256 Score = 172 bits (190), Expect = 1e-38 Identities = 381/557 (68%), Gaps = 22/557 (4%) Strand=Plus/Plus Query 15625 GGCCGATCTGCGGGCCATCTTCGCCATGCGGCCGGAGGCCGCCATCGAGTACCTGGAGCG 15684 ||||||||| || ||||||| | || || | |||||||||| ||||| || | Sbjct 302 GGCCGATCTCAAAGCGATCTTCGGCCTGGATCCAGCCGCCGCCATCGCCTACCTCAAGGG 361 Query 15685 CAAGGGGTTCGCCATTACCTGGAACTGGCACGA--TGTT-GACGCGGCCACCCATGCCCG 15741 ||| || | || |||||||| | ||||| || || | || |||||| || | || Sbjct 362 CAAAGGCTATGCGGTTACCTGGGATTGGCAGGACATGCTCGATGCGGCC---CACGACCA 418 Query 15742 AGCGCTGACGGTGGCCAAGGCGGCACGCCTGGACGTGCTCCAGGACATCCGCGACGCCCT 15801 |||| | || || |||||||| |||||||| ||||| |||||||||||| | | Sbjct 419 AGCGTTCACCGTTGCCAAGGCCATGCGCCTGGATCTGCTCTCGGACATCCGCGAATCATT 478 Query 15802 GGTCGATAACCTGGAACGTGGCGGAACGCTGCGCGACTTC-CAGCGCAACCTGCGGCCGA 15860 || |||| | ||| || |||| | ||| | | ||| ||| ||| Sbjct 479 GGAGAGCGCCCTGCAGGAAGGCAAGACCCTGCAGCAGTTCACCAAGGAAC-TGCAGCCTG 537 Query 15861 TCCTGGAGGCCAAGGGCTGGTGGGGGCGTCAGATAGTGGTTGCGCCGGACGGTGGC---G 15917 |||||||| | || |||||||| ||| | |||| || | | | | ||| | Sbjct 538 TCCTGGAGCAACAAGGTTGGTGGGGCAAGCAGGTCCTGGT--CGACAGCCAG-GGCAATG 594 Query 15918 CCGAGGTCGCCCAGCTCGGCAGCCCGCGCCGGCTGGAAACGATCTATCAGACCAACATGC 15977 | ||| | | |||||| || ||||| |||||||| | |||||||| ||||||||| ||| Sbjct 595 CGGAGATGGTCCAGCTGGGTAGCCCACGCCGGCTTAAGACGATCTACCAGACCAACCTGC 654 Query 15978 AATCGGCCTACATGGCCGGGCGCTATGCCGCCGCATACGAGGCCAGGG---AAACCCACC 16034 | ||||| |||||||| ||| | ||||| || |||| || || | ||||| | Sbjct 655 AGAGCGCCTATATGGCCGGTCGCAAATCCGCC--ATG-GAGGACACGGTCGAGACCCATC 711 Query 16035 CCTACTGGATGTATGTGGCCGTCATGGACAGCGTCACCCGGCCCAGCCATGCGGCGCTAC 16094 | ||||||| || | || || ||||| || ||||| || |||||||| ||||| Sbjct 712 CGTACTGGAGCTACATCGCGGTGATGGATGGCAAGACCCGACCTAGCCATGCTGCGCTCA 771 Query 16095 ATGGCAAGGTGTTCCGCTGGGACGACCCGATCTGG-CAACACATCATGCCGCCGAATGGC 16153 | || ||||| ||| ||||||||||||||| | || |||| | ||||| || || Sbjct 772 ACGGTGTGGTGTACCGACATGACGACCCGATCTGGTCCAC-CATCTTCCCGCCCAACGGG 830 Query 16154 TACAACTGCCGGTGCCG 16170 | |||||||| ||||| Sbjct 831 TTTAACTGCCGCTGCCG 847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119189281804096