Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_024785.1 Length=44844 Score E Sequences producing significant alignments: (Bits) Value seq105100 95.1 3e-15 >seq105100 Length=315 Score = 95.1 bits (104), Expect = 3e-15 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 17354 TTACTTCTTTAGAAATAAACTTCTTTCAGCAGCACGGCGCTTAACTAAACCTTCAAGAAC 17413 ||| ||||||| |||||| ||| || || ||||||| ||| ||||||| | || Sbjct 103 TTATTTCTTTAAAAATAATGCTCTCTCTGCTTCACGGCGGCGAACCAAACCTTTCAACAC 162 Query 17414 TCGACCACCAGCTTTTTTCCACGCTGGGAATTGATCGGCAGCACCTTGATAATCGCCATT 17473 | ||| || ||||| ||||| | | |||||||| || ||| ||| |||||| | Sbjct 163 ACTACCGCCCGCTTTATTCCATACCAGAAATTGATCCGCTGCAGCTTTATAATCTAAAGC 222 Query 17474 ATTAAGAAGTTTGAGTAAAGTTGAATTTTTAAAAGCACCTGAGCCAATGTTGTAGGTCAG 17533 ||| ||| || | ||||||||| ||||||||||| | || ||||| || | | Sbjct 223 ATTCAGATACTTCACTAAAGTTGACGTTTTAAAAGCATTAGTCCCGATGTTATAAGCTAA 282 Query 17534 TGATACTAGAGCGTCAAATTGATTTTG 17560 || || | || || ||||||||||| Sbjct 283 AGAAACCAATGCATCGAATTGATTTTG 309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143013094116928