Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4302 87.8 2e-12 >seq4302 Length=1545 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 46778 GGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAGCGCATGGT 46837 ||| ||||||||| |||| |||||||| || | | || | || ||||| || || Sbjct 1545 GGCGCAGTGGGCCCTGAAATGGATCGACGGCTCG---GAGACTTTCGCGGAGCGGATCGT 1489 Query 46838 GGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTTTACAT 46897 ||| ||||| || || || | || || ||||| || || ||| || |||| | Sbjct 1488 GGCCTTCGCCTGCGTGGAGGGGATCTTCTTCTCGGGAAGCTTCTGCGCGATATTTTGGCT 1429 Query 46898 TAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGA 46957 |||| || | |||||||| ||||| ||| ||||||||||||||||| || || Sbjct 1428 AAAAAAGCGCGGGTTGATGCCGGGTCTGACCTTCTCGAACGAGTTGATCTCGCGAGATGA 1369 Query 46958 AGGACTACACACGGACTTTGCGTGTCT 46984 ||| || ||| ||||| ||||| || Sbjct 1368 AGGCCTCCACTGCGACTTCGCGTGCCT 1342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475330164416640