Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq134381 82.4 7e-11 >seq134381 Length=6558 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| || ||||| || || || || || || | ||||| |||| || || | Sbjct 4107 CATGCAGGTTTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTCGAGGTAGAGAGCTC 4048 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||| || || | || ||| || ||| ||||| |||||||| ||||| ||||| Sbjct 4047 TGATACCATTGACAATGTCAAAGCCAAGATTCAAGATAAGGAGGGTATCCCGCCGGATCA 3988 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 |||||| | || | || ||| || || | || |||| | | | | | |||||| || Sbjct 3987 GCAAAGGTTGATCTTCGCCGGAAAGCAGTTGGAGGATGGTCGTACTTTGGCCGATTATAA 3928 Query 25354 TATTCAAAAAGAATCCAC 25371 ||| || ||||| ||||| Sbjct 3927 TATCCAGAAAGAGTCCAC 3910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443898075271680