Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_027298.1 Length=36814 Score E Sequences producing significant alignments: (Bits) Value seq7292 188 2e-43 >seq7292 Length=1256 Score = 188 bits (208), Expect = 2e-43 Identities = 381/555 (69%), Gaps = 18/555 (3%) Strand=Plus/Plus Query 16401 GGCCGATCTGCGGGCCATCTTCGCCATGCGGCCGGAGGCCGCCATCGAGTACCTGGAGCG 16460 ||||||||| || ||||||| | || || | |||||||||| ||||| || | Sbjct 302 GGCCGATCTCAAAGCGATCTTCGGCCTGGATCCAGCCGCCGCCATCGCCTACCTCAAGGG 361 Query 16461 CAAAGGCTTCTCGATCACCTGGAACTGGCACGA--TGTT-GACGCGGCCACCCATGCCCG 16517 |||||||| || | |||||| | ||||| || || | || |||||| || | || Sbjct 362 CAAAGGCTATGCGGTTACCTGGGATTGGCAGGACATGCTCGATGCGGCC---CACGACCA 418 Query 16518 AGCGCTGACGGTGGCCAAGGCGGCACGCCTGGACGTGCTCCAGGACATCCGCGACGCACT 16577 |||| | || || |||||||| |||||||| ||||| |||||||||||| || | Sbjct 419 AGCGTTCACCGTTGCCAAGGCCATGCGCCTGGATCTGCTCTCGGACATCCGCGAATCATT 478 Query 16578 GGTCGATAACCTGGAACGTGGCGGAACGCTGCGCGACTTC-CAGCGCAACCTGCGGCCGA 16636 || |||| | ||| || |||| | ||| | | ||| ||| ||| Sbjct 479 GGAGAGCGCCCTGCAGGAAGGCAAGACCCTGCAGCAGTTCACCAAGGAAC-TGCAGCCTG 537 Query 16637 TCCTGGAGGCCAAGGGCTGGTGGGGACGCCAGATTGTGGTTGC--GCCGGACGGCGGCGC 16694 |||||||| | || |||||||| ||| | |||| | ||| | ||| || Sbjct 538 TCCTGGAGCAACAAGGTTGGTGGGGCAAGCAGGTCCTGGTCGACAGCCAG--GGCAATGC 595 Query 16695 CGAGGTCGCCCAGCTCGGCAGCCCGCGCCGGCTGGAAACCATCTATCAGACCAACATGCA 16754 ||| | | |||||| || ||||| |||||||| | || ||||| ||||||||| |||| Sbjct 596 GGAGATGGTCCAGCTGGGTAGCCCACGCCGGCTTAAGACGATCTACCAGACCAACCTGCA 655 Query 16755 GTCGGCCTACATGGCCGGGCGCTATGCCGCCGCATACGAGGCCAGGG---AAACCCACCC 16811 | ||||| |||||||| ||| | ||||| || |||| || || | ||||| || Sbjct 656 GAGCGCCTATATGGCCGGTCGCAAATCCGCC--ATG-GAGGACACGGTCGAGACCCATCC 712 Query 16812 CTACTGGATGTATGTGGCCGTCATGGACAGCGTCACCCGGCCCAGCCATGCGGCGCTACA 16871 ||||||| || | || || ||||| || ||||| || |||||||| ||||| | Sbjct 713 GTACTGGAGCTACATCGCGGTGATGGATGGCAAGACCCGACCTAGCCATGCTGCGCTCAA 772 Query 16872 TGGCAAGGTGTACCGCTGGGACGACCCGATCTGGCAGCACATCATGCCGCCGAATGGCTA 16931 || ||||||||| ||||||||||||||| |||| | ||||| || || | Sbjct 773 CGGTGTGGTGTACCGACATGACGACCCGATCTGGTCCACCATCTTCCCGCCCAACGGGTT 832 Query 16932 CAACTGCCGCTGCCG 16946 |||||||||||||| Sbjct 833 TAACTGCCGCTGCCG 847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117382706540288