Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_027384.1 Length=37359 Score E Sequences producing significant alignments: (Bits) Value seq7292 183 7e-42 >seq7292 Length=1256 Score = 183 bits (202), Expect = 7e-42 Identities = 380/555 (68%), Gaps = 18/555 (3%) Strand=Plus/Plus Query 16955 GGCCGATCTGCGGGCCATCTTCGCCATGCGGCCGGAGGCCGCCATCGAGTACCTGGAGCG 17014 ||||||||| || ||||||| | || || | |||||||||| ||||| || | Sbjct 302 GGCCGATCTCAAAGCGATCTTCGGCCTGGATCCAGCCGCCGCCATCGCCTACCTCAAGGG 361 Query 17015 CAAAGGCTTCTCGATCACCTGGAACTGGCACGA--TGTT-GACGCGGCCACCCATGCCCG 17071 |||||||| || | |||||| | ||||| || || | || |||||| || | || Sbjct 362 CAAAGGCTATGCGGTTACCTGGGATTGGCAGGACATGCTCGATGCGGCC---CACGACCA 418 Query 17072 AGCGCTGACGGTGGCCAAGGCGGCACGCCTGGACGTGCTCCAGGACATCCGCGACGCACT 17131 |||| | || || |||||||| |||||||| ||||| |||||||||||| || | Sbjct 419 AGCGTTCACCGTTGCCAAGGCCATGCGCCTGGATCTGCTCTCGGACATCCGCGAATCATT 478 Query 17132 GGTCGATAACCTGGAACGTGGCGGAACGCTGCGCGACTTC-CAGCGCAACCTGCGGCCGA 17190 || |||| | ||| || |||| | ||| | | ||| ||| ||| Sbjct 479 GGAGAGCGCCCTGCAGGAAGGCAAGACCCTGCAGCAGTTCACCAAGGAAC-TGCAGCCTG 537 Query 17191 TCCTGGAGGCCAAGGGCTGGTGGGGACGCCAGATTGTGGTTGC--GCCGGACGGCGGCGC 17248 |||||||| | || |||||||| ||| | |||| | ||| | ||| || Sbjct 538 TCCTGGAGCAACAAGGTTGGTGGGGCAAGCAGGTCCTGGTCGACAGCCAG--GGCAATGC 595 Query 17249 CGAGGTCGCCCAGCTCGGCAGCCCGCGCCGGCTGGAAACCATCTATCAGACCAACATGCA 17308 ||| | | |||||| || ||||| |||||||| | || ||||| ||||||||| |||| Sbjct 596 GGAGATGGTCCAGCTGGGTAGCCCACGCCGGCTTAAGACGATCTACCAGACCAACCTGCA 655 Query 17309 GTCGGCCTACATGGCTGGGCGCTATGCCGCCGCATACGAGGCCAGGG---AAACTCATCC 17365 | ||||| ||||| || ||| | ||||| || |||| || || | || ||||| Sbjct 656 GAGCGCCTATATGGCCGGTCGCAAATCCGCC--ATG-GAGGACACGGTCGAGACCCATCC 712 Query 17366 TTACTGGATGTATGTGGCCGTCATGGACAGCGTCACCCGGCCCAGCCATGCGGCGCTACA 17425 ||||||| || | || || ||||| || ||||| || |||||||| ||||| | Sbjct 713 GTACTGGAGCTACATCGCGGTGATGGATGGCAAGACCCGACCTAGCCATGCTGCGCTCAA 772 Query 17426 TGGCAAGGTGTACCGCTGGGACGACCCGATCTGGCAGCACATCATGCCGCCGAATGGCTA 17485 || ||||||||| ||||||||||||||| |||| | ||||| || || | Sbjct 773 CGGTGTGGTGTACCGACATGACGACCCGATCTGGTCCACCATCTTCCCGCCCAACGGGTT 832 Query 17486 CAACTGCCGCTGCCG 17500 |||||||||||||| Sbjct 833 TAACTGCCGCTGCCG 847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119122253393248