Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq132854 93.3 1e-14 >seq132854 Length=843 Score = 93.3 bits (102), Expect = 1e-14 Identities = 127/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 11249 GTCATCCCAGGCGCGAATAAACTCTCCTCGCAGGTCTGGAACGTTGAATGTAGTAGCACC 11308 |||||||||| |||| || ||||| || ||||| || || | ||||| || || | ||| Sbjct 49 GTCATCCCAGCCGCGGATGAACTCACCGCGCAGATCGGGCAGATTGAAGGTGGTGGAACC 108 Query 11309 GTCACCCTCCCCAAACGTTGTGCCGATGGCAGAAAACAG-GTCTGCGTAAGCTGTTCGAC 11367 ||| || |||| || || || |||||||| | || || ||| || || | || || | Sbjct 109 GTCGCCGGCCCCGAAGGTGGTACCGATGGCGGCGAATAGCGTC-GCATAGGTAGTGCGGC 167 Query 11368 TGACCGCTGCTCCGTTGGCTTTCAGCCATCCAGTTGGTGCACTGTTGCGAGCAAA 11422 |||| || || ||||||||||| || | ||| | || || || |||| || || Sbjct 168 TGACGGCGGCACCGTTGGCTTTGAGATAGCCATTCGGAGCGGTGGTGCGGGCGAA 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132869461275264