Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4302 113 6e-20 >seq4302 Length=1545 Score = 113 bits (124), Expect = 6e-20 Identities = 302/454 (67%), Gaps = 16/454 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || |||||||| | |||||| ||||| || |||||||| | | || || |||||| Sbjct 1060 TACTCCCCAACTCTCTTCTCAAAGAAATTGGTCTTCCCCTGAAGACTAATCAGCTCCATC 1119 Query 129788 AAATCAAATGGGTTCTTTGAGT--TCCAAATTGCTGGCAC-TCCAATCTGTTTGAGGAGA 129844 ||||||||||||||| | | || || | || ||| | | || || Sbjct 1120 CAATCAAATGGGTTCTGCACATCATACAGTTTCC---CATATCCCAACGCACCCAGCAGC 1176 Query 129845 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTA 129904 | ||| | |||| |||| ||||||| | |||| || |||||| || | | | Sbjct 1177 CTATCAGCGACGAACTCGATGTACTGACCCATCAGATCACCGTTCATCCCAACTAAGGCG 1236 Query 129905 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCG 129964 || || | |||||| ||| |||| || |||| ||||| || || | ||||||||| | Sbjct 1237 CACGGTAACGCGTCGCAGACGAACTCCCTCTCTATGTCAACCGCGTTCCGCACGATTGAC 1296 Query 129965 TGAATGGTCTCC---GTGCCAGGTCTATT--GCGCAAAGTCTTGAAGAGTTCCACGGCAA 130019 | | | |||| ||| || | || | | | | | || || |||| | | Sbjct 1297 TTCACGCGCTCCTCGGTG--AGCTTCATCCGGAGGAGGGAGTAGAGAAGG--CACG-CGA 1351 Query 130020 ACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 130079 | || |||||| || || || || ||||| | || ||||||||| |||||| |||| Sbjct 1352 AGTCGCAGTGGAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTCAGACCCGGCA 1411 Query 130080 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 130139 | | || ||||| || | ||| || ||||| || || || |||||||||||||||| Sbjct 1412 TCAACCCGCGCTTTTTTAGCCAAAATATCGCGCAGAAGCTTCCCGAGAAGAAGATCCCCT 1471 Query 130140 CCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173 |||| || ||||| || | || ||||| || || Sbjct 1472 CCACGCAGGCGAAGGCCACGATCCGCTCCGCGAA 1505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 616772969869440