Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq115971 82.4 2e-11 >seq115971 Length=1990 Score = 82.4 bits (90), Expect = 2e-11 Identities = 164/242 (68%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 10584 TCCCGGGTAATGTTCAGGCCAATAAGGTGGCGGCTTGCAGGTTTGGCATCAGCAATCAGC 10643 ||| || | ||| |||||| | ||||| |||| | || ||| || | |||||| Sbjct 506 TCCAGGCTGATGGCCAGGCCGACCAGGTGCCGGCCGACCGGGCGGGCGTCGTCGATCAGC 565 Query 10644 CGTTCCATTTCCTGATACATTGCCTCTGTGATACCGCTTTCCAGTACACCAATATCAAGC 10703 | | ||| | | ||||| | ||| ||||| ||||| || || || || | || || Sbjct 566 AGGTTCATGGCGTCGTACATGGTCTCGGTGATGCCGCTGTCGAGCACGCCGACGTCCAGG 625 Query 10704 CGGAAGGTGCCTG----GCGGGTC--ACTGTTTTCCCACCACTCCGTCACGTTAATGAGA 10757 ||||||||||| | || |||| || | | ||||||||| ||| || || Sbjct 626 CGGAAGGTGCCCGGAGTGCCGGTCGGGCTCTCCTGCCACCACTCGTGGACGCGGATCAGG 685 Query 10758 TAGCCGAGCGGCTCCACCACACGCCGGATTGCGCCGATAGTGCCTTTATGACAGTGGATG 10817 ||||| || || |||||||| || || | |||||||| ||||| || || ||||| | Sbjct 686 TAGCCCAGGGGTTCCACCACCCGGCGCAGGGCGCCGATGGTGCCCTTGTGGGCGTGGACG 745 Query 10818 AA 10819 || Sbjct 746 AA 747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104171725945056