Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq129179 105 1e-17 >seq129179 Length=2549 Score = 105 bits (116), Expect = 1e-17 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 294860 ATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTAC 294919 ||||||||| || ||| ||||||||| |||||||||||||||||||||||||||||| Sbjct 681 ATGGTGCCGGCACCAGGAGTCGAACCCGG-GACCTACTGATTACAAGTCAGTTGCTCTAC 623 Query 294920 CAGCTGAGCTATAACGGCAA 294939 ||||||||||||| |||||| Sbjct 622 CAGCTGAGCTATACCGGCAA 603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 986608788674672