Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq118902 96.9 2e-15 >seq118902 Length=7414 Score = 96.9 bits (106), Expect = 2e-15 Identities = 144/201 (72%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 96710 AACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAATTGGGCCATTTCGTTGC 96769 || || | |||||| || | || || || | || | |||||||| || || || || Sbjct 7210 AAGCGAGTGTATTGACCTTCGAAGGCTAAACGAACGCTACCAATTGGACCGTTACGCTGT 7269 Query 96770 TTTCCGATAATTACCTCGGCAATGCC--CTTCATTTCGCTATCCGGGTGATAAACTTCGT 96827 || |||||||| | || || | || |||| ||| | | || || ||||||||| | Sbjct 7270 TTACCGATAATAATTTCTGCTGTACCTGCTTC-TTTAGAT-TCTTTGTTATAAACTTCAT 7327 Query 96828 CGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCACGTAAAT 96887 | || || | |||||| || | || || |||||||| ||||| || ||||||||||| | Sbjct 7328 CACGGTAAATAAACATAATTAAATCGGCATCCTGCTCGATTGCACCCGATTCACGTAAGT 7387 Query 96888 CTGAATTTACCGGTCGTTTGT 96908 |||| |||| || ||||||| Sbjct 7388 CTGACATTACTGGACGTTTGT 7408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330032043901984