Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06]
215,024 sequences; 206,414,839 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq117806 147 2e-30
seq210190 131 1e-25
seq122442 131 1e-25
seq25063 129 4e-25
seq134381 123 2e-23
seq161123 118 8e-22
seq149362 114 9e-21
seq16096 113 3e-20
seq29583 109 4e-19
seq37850 102 6e-17
seq20564 89.7 4e-13
seq204338 87.8 1e-12
seq176225 82.4 5e-11
seq55328 82.4 5e-11
>seq117806
Length=5035
Score = 147 bits (162), Expect = 2e-30
Identities = 159/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| ||||| || || |||||| ||||||||||| |||||||| ||| |||| ||
Sbjct 3674 CACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTC 3615
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| ||||| | |||||||| || | || | |||||||| |||
Sbjct 3614 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTG 3555
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | |||||||||| ||| |||||||| | || || |||||
Sbjct 3554 GATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTT 3495
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| ||||| ||||||||||| ||||||
Sbjct 3494 CCCCGTTAGGGTTTTCACGAAGATCTGCATG 3464
>seq210190
Length=6381
Score = 131 bits (144), Expect = 1e-25
Identities = 174/237 (73%), Gaps = 6/237 (3%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||||| | ||| ||||| || || |||||| ||||| ||||| ||
Sbjct 2990 CATGCCACCACGAAGTCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTC 2931
Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
||||| || || |||| || |||||||| ||||||||||| | | ||| ||||||
Sbjct 2930 AGCGAG--GGTCCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCT 2873
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGA 44283
| ||| | || ||||| ||| ||||| |||| | ||| | |||||||||| |
Sbjct 2872 GGAGGGATGCCCTCCTTGTCCTGGATCTT-GGCTTTGACGTTGTCGATGGTGTCGGAGCT 2814
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
|||||||| | || | ||||| || || ||||||||||| ||||| ||||||||
Sbjct 2813 CTCCACCTCGAGGGTGACGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATGAT 2757
>seq122442
Length=1060
Score = 131 bits (144), Expect = 1e-25
Identities = 170/233 (73%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || |||| || | ||||| |||||| || |||||| ||||| ||||||||
Sbjct 731 CATACCACCCCTCAATCGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATC 790
Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
||| || || || |||| |||| |||||| |||||||||||||| | |||||||||
Sbjct 791 GGCCAG--GGTCCTGCCGTCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCC 848
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| || | || ||||| ||| ||||| ||| | | | || ||||||| |
Sbjct 849 GGGGGAATTCCCTCCTTATCCTGGATCTTAGCCTTGACGTTGTCAATCGTGTCGGAGCTC 908
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || ||||| || || ||||||||||| ||||| |||||
Sbjct 909 TCAACCTCGAGAGTGATGGTCTTCCCGGTAAGGGTCTTCACAAAGATCTGCAT 961
Score = 123 bits (136), Expect = 2e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| ||| |||||| ||||| |||||||| || || ||| | || ||
Sbjct 297 ACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGGGTGCGACCATCCTCG 356
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||||||||| ||||||||||| | |||||| || | || | ||||||||| |||
Sbjct 357 AGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCCTGG 416
Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| |||| | || | ||||| || | |||||||||| || || |||||
Sbjct 417 ATCTT-GGCTTTGACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGTGATGGTCTT 475
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || | |||||||| ||||| |||||
Sbjct 476 TCCGGTCAAAGTCTTCACAAAGATCTGCAT 505
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || || | ||||| ||| || || |||||| ||||| ||||||||
Sbjct 503 CATCCCACCACGAAGCCTGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAATC 562
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || | | || |||| ||||| || || |||||||| | ||||||||| |
Sbjct 563 CGCAAGAGTCCTGCCATCCTCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGG 622
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||| | | | || || |||| | ||
Sbjct 623 TGGGATCCCTTCCTTATCCTGGATCTTGGCCTTGACGTTATCGATTGTATCGGAGCTCTC 682
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| ||||| ||||| || || | ||||||||||| || |||||
Sbjct 683 AACCTCCAGGGTAATGGTCTTCCCTGTCAAAGTCTTCACGAAAATCTGCAT 733
>seq25063
Length=710
Score = 129 bits (142), Expect = 4e-25
Identities = 157/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||||| ||| ||||| |||||||||||||| || || ||| | || ||
Sbjct 387 CACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATCCTC 446
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||||||||||| ||||||||| || | || | || ||||| |||
Sbjct 447 AAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTG 506
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | |||||||| | | || ||||| | || || |||
Sbjct 507 AATCTTGGCCTTGACATTGT--CAATGGTGTCAGAGCTCTCGACCTCAAGGGTGATGGTC 564
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| | |||||| |||||||| |||||
Sbjct 565 TTTCCCGTCAAGGTCTTGACGAAGATCTGCAT 596
Score = 118 bits (130), Expect = 8e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||||| ||| ||||| ||||||||||| || || || || | || ||
Sbjct 159 CACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGGCCATCCTC 218
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||||||||| | | |||||| |||| || | ||| ||||| |||
Sbjct 219 AAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTG 278
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | |||||||| | | |||||||||| || || |||||
Sbjct 279 GATCTTAGCCTTCACATTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGTGATGGTCTT 338
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || | |||||| || ||||| |||||
Sbjct 339 TCCGGTCAAGGTCTTGACAAAGATCTGCAT 368
>seq134381
Length=6558
Score = 123 bits (136), Expect = 2e-23
Identities = 170/235 (72%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || || | ||| ||||| || || |||||| ||||| ||||| ||
Sbjct 4104 CATGCCACCACGAAGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTC 4163
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||||| || |||| || |||||||| ||||||||||| | | ||| || ||||
Sbjct 4164 TGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGGTCTGG 4223
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| | || ||||| ||| ||||| |||| ||||| | |||||||||| | |
Sbjct 4224 AGGGATGCCCTCCTTGTCCTGGATCTT-GGCTTTGATGTTGTCGATGGTGTCGGAGTTCT 4282
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
| ||||| | || || ||||| || || |||||||| || ||||| ||||||||
Sbjct 4283 CTACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTTACAAAGATCTGCATGAT 4337
>seq161123
Length=4290
Score = 118 bits (130), Expect = 8e-22
Identities = 171/237 (72%), Gaps = 6/237 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || | ||| | | |||| ||| | || |||||||| ||||||||
Sbjct 2545 TTGCATTCCACCACGCAGACGGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTA 2604
Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|| || ||||| | |||| |||| ||| || || |||||||| | | |||||||
Sbjct 2605 GTCCGCAAGAGTT--CTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGA 2662
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280
|||| || | ||| ||||| ||| ||||| ||||| || || | || || || |
Sbjct 2663 TCTGGGGGAATACCCTCCTTGTCCTGGATCTT-TGCTTTAACATTGTCAATTGTATCAGA 2721
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||||||| || || ||||| || || ||||||||||| |||||||||||
Sbjct 2722 GCTTTCCACCTCCAATGTGATTGTCTTCCCAGTAAGGGTCTTCACAAAGATTTGCAT 2778
Score = 118 bits (130), Expect = 8e-22
Identities = 167/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || | || | | ||||||||| || ||| ||| |||||||| |||||
Sbjct 2773 TTGCATTCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTA 2832
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| ||||| || | || || ||||| || ||||||||||| | | |||||||||
Sbjct 2833 ATCTGCGAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATC 2892
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | || ||||| ||| ||||| ||| | | | || ||||| | |
Sbjct 2893 TGGGGGGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCT 2952
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||||| || || ||||| || ||||| ||||| || ||||| ||||||
Sbjct 2953 CTCAACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCATG 3007
Score = 105 bits (116), Expect = 5e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || ||||||||| ||||||||||| || || || | || ||
Sbjct 2114 ACGAGGTGAAGGGTTGACTCCTTTTGAATGTTGTAATCTGCTAGAGTCCGGCCATCTTCA 2173
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || ||||| || | | |||||| || | ||| | || ||||| |||
Sbjct 2174 AGCTGCTTACCAGCAAATATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 2233
Query 44249 ATCTTCTGC-TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| |||| | | || || || | || ||||||| || || |||||
Sbjct 2234 ATCTT-TGCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTT 2292
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| |||||||||||||| ||||| |||||
Sbjct 2293 TCCAGTGAGGGTCTTCACAAAGATCTGCAT 2322
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| || || || |||||| || ||||||||||| || ||| | | || ||
Sbjct 2341 CACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCCAGTGTCCTACCATCCTC 2400
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || |||||||| | | |||||| |||| || | ||||| || |||
Sbjct 2401 GAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTG 2460
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|| ||| ||| | | | || ||||| | | |||||| |||| ||||| || ||
Sbjct 2461 AATTTTCGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAATAGTTTT 2520
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | |||||||| |||||||||||
Sbjct 2521 CCCTGTCAAAGTCTTCACAAAGATTTGCAT 2550
>seq149362
Length=6446
Score = 114 bits (126), Expect = 9e-21
Identities = 171/236 (72%), Gaps = 10/236 (4%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTG-AAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165
|||||| || | ||||| | |||| ||| ||| || | |||||||| |||||||| |
Sbjct 1974 CATTCCACCACGCAGTCGGAGAACCAAGTGCAAGGTTGAT-TCCTTTTGAATGTTGTAGT 1916
Query 44166 CGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
| || ||||| | |||| |||| ||| || || |||||||| | | |||||||||
Sbjct 1915 CTGCAAGAGTT--CTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATC 1858
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281
|| || | ||| ||||| ||| |||||| ||| || ||| | || || |||| |
Sbjct 1857 TGGGGGAATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGT--CAATTGTATCGGAG 1800
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||||| || || ||||| || || || ||||| || ||||| |||||
Sbjct 1799 CTTTCCACCTCCAGGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTGCAT 1744
Score = 113 bits (124), Expect = 3e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || | || | | |||||||||||| || |||||||||||| || |||||
Sbjct 1746 CATTCCACCACGTAGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTATAATC 1687
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||| || ||| | || || ||||| || ||||||||||| | | |||||||||||
Sbjct 1686 GGCAAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGG 1627
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | || || || | ||
Sbjct 1626 GGGTATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTC 1567
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| || || ||||| || ||||| ||||| || ||||| ||||||
Sbjct 1566 AACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCATG 1515
Score = 107 bits (118), Expect = 1e-18
Identities = 166/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||||| | |||| || || ||| ||| |||||||||||||| ||
Sbjct 1518 CATGCCACCACGGAGTCTGAGAACCAAATGGAGAGTGGACTCTTTTTGGATGTTGTAGTC 1459
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|||||| ||| | || || |||||||| || |||||||||| | || || || |
Sbjct 1458 AGCGAGTGTCCGCCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGTTGGTCCGG 1399
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGA 44283
|| | || ||||| || ||||| ||||| || ||| | || ||||| | |
Sbjct 1398 GGGAATTCCCTCCTTGTCTTGGATCTT-TGCTTTGACATTGT--CAATAGTGTCAGAGCT 1342
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| ||||| | || || ||||| || |||||||| ||||| ||||| |||||
Sbjct 1341 TTCAACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 1288
Score = 105 bits (116), Expect = 5e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || ||||||||| ||||||||||| || || | | | || ||
Sbjct 2636 ACAAGGTGAAGGGTCGACTCCTTTTGAATGTTGTAATCCGCCAGAGTCCTCCCATCTTCA 2577
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || ||||| || | | |||||| |||| ||| | |||||||| |||
Sbjct 2576 AGCTGCTTACCAGCAAATATGAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGA 2517
Query 44249 ATCTTCTGC-TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| |||| | | || || || | || ||||||| || || |||||
Sbjct 2516 ATCTT-TGCTTTCACATTATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTT 2458
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || || |||||||| ||||| |||||
Sbjct 2457 TCCAGTAAGTGTCTTCACAAAGATCTGCAT 2428
Score = 95.1 bits (104), Expect = 9e-15
Identities = 166/238 (70%), Gaps = 8/238 (3%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || | ||| | | |||| ||| | || |||||||| ||||||||
Sbjct 2205 TTGCATTCCACCACGCAGACGGAGAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTA 2146
Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|| || ||||| | |||| |||| ||| || || |||||||| | | |||||||
Sbjct 2145 GTCTGCAAGAGTT--CTTCCGTCTTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGA 2088
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279
|||| || | ||| ||||| ||| || || ||| || ||| | || || || |
Sbjct 2087 TCTGGGGGGATACCCTCCTTGTCCTGGATTTTTGCCTTGACATTGT--CAATTGTATCAG 2030
Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||||||| || || ||||| || || || ||||| || ||||| |||||
Sbjct 2029 AGCTTTCCACCTCCAAGGTGATTGTCTTCCCTGTAAGCGTCTTTACAAAGATCTGCAT 1972
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| || || || ||| || || ||||||||||| || ||| | |||| ||
Sbjct 2409 CACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCCAGTGTCCTGCCGTCCTC 2350
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || ||||| || | | |||||| |||| || | ||||| || |||
Sbjct 2349 AAGCTGCTTTCCTGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTG 2290
Query 44248 TATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| | | ||| | || ||||| | | |||||| |||| ||||| || |
Sbjct 2289 AATCTT-TGCCTTGACGTTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAATGGTTT 2231
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | |||||||| || ||||||||
Sbjct 2230 TCCCGGTCAAAGTCTTCACAAAAATTTGCAT 2200
>seq16096
Length=889
Score = 113 bits (124), Expect = 3e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||| ||| || ||| ||||||||| || || || ||
Sbjct 597 CATACCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTC 538
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| | | || || |||||||| || ||||| ||||| | |||||| ||||
Sbjct 537 TGCAAGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGG 478
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||| ||||| ||| || || |||| | | |||||||| | | |||
Sbjct 477 GGGAATACCCTCCTTATCCTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTC 418
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||| |||| || || || || || ||||||||||| || ||||||||||||
Sbjct 417 CACTTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCATG 366
Score = 104 bits (114), Expect = 2e-17
Identities = 164/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | |||||||| |||||| || ||||| || || |||||
Sbjct 372 TTGCATGCCACCACGGAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGAATATTGTA 313
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| || || ||| | || || ||||| ||||| ||||| || | | |||||| ||
Sbjct 312 GTCAGCAAGAGTGCGACCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTC 253
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| ||| | || ||||| ||| ||||| ||| | | | || || || |
Sbjct 252 TGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCTGAACT 193
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||| ||||||| || || |||||||| || |||||||| || ||||||||||||
Sbjct 192 TTCAACCTCCAAGGTGATTGTCTTTCCGGTAAGGGTCTTGACAAAGATTTGCATG 138
>seq29583
Length=650
Score = 109 bits (120), Expect = 4e-19
Identities = 168/237 (71%), Gaps = 6/237 (3%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | ||||| | |||||||||||| || |||||||| || |||||
Sbjct 497 TTGCATGCCACCGCGGAGTCTGAGCACCAGGTGAAGAGTCGATTCCTTTTGAATATTGTA 438
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| || || ||| | || || |||||||| || ||||| |||| | ||||| ||
Sbjct 437 GTCAGCAAGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTC 378
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGC 44280
|| || | |||||||| || || || |||| || ||| | |||||||| |
Sbjct 377 TGGGGGAATGCCTTCCTTATCTTGGAT-TTTGGCTTTGACATTGT--CGATGGTGTCAGA 321
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||| ||||| | || || ||||| || ||||| ||||| |||||||| |||||
Sbjct 320 GCTTTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 264
Score = 96.9 bits (106), Expect = 2e-15
Identities = 117/157 (75%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242
|| || ||||||||||| |||||||| | | |||||| |||| || | ||| || ||
Sbjct 646 TCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCTTTG 587
Query 44243 TCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301
||| ||||| ||||| | ||| | |||||||||| || ||||||| || ||
Sbjct 586 TCCTGAATCTT-TGCTTTCACGTTGTCAATGGTGTCGGAACTCTCAACCTCCAAGGTTAT 528
Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || || ||||| |||||||| ||||||||||||
Sbjct 527 GGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCATG 491
>seq37850
Length=568
Score = 102 bits (112), Expect = 6e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || || | ||||| || || || |||||| ||||| ||||||||
Sbjct 103 CATCCCACCACGAAGCCTGAGCACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATC 162
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || | | || |||| ||||| || || |||||||| | ||||||||| |
Sbjct 163 CGCAAGAGTCCTGCCATCCTCCAATTGCTTACCAGCGAAGATCAACCTCTGCTGATCCGG 222
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||| | | | || ||||||| | ||
Sbjct 223 TGGGATCCCTTCCTTATCCTGGATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTCTC 282
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | || || ||||| || ||||| ||||||||||||||||||||
Sbjct 283 AACTTCGAGAGTGATTGTCTTCCCGGTGAGAGTCTTCACGAAGATTTGCAT 333
Score = 102 bits (112), Expect = 6e-17
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCG 44185
||||| || || ||| |||||| ||||| ||||||||||| |||| || | ||
Sbjct 352 CACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTT--CGGCCATCC 409
Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245
|||| |||||| ||||| |||||||| | |||||| || | || | || ||||| |||
Sbjct 410 TCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 469
Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| | | | ||||| || | | || ||||| | || ||||||
Sbjct 470 TGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCTCTCGACCTCGAGAGTGATCGTC 529
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||| || |||||||| |||||
Sbjct 530 TTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 561
>seq20564
Length=789
Score = 89.7 bits (98), Expect = 4e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168
|||| || |||| |||||||| ||||| || || ||| |||||||| || ||||| |
Sbjct 515 TTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAATCTG 574
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| || || | || |||| |||||| || ||||| |||| | ||||||||||| ||
Sbjct 575 CAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTGGAG 634
Query 44229 GCACACCTTCCTTTTCC 44245
| | |||||||| |||
Sbjct 635 GGATGCCTTCCTTATCC 651
>seq204338
Length=3429
Score = 87.8 bits (96), Expect = 1e-12
Identities = 104/139 (75%), Gaps = 4/139 (3%)
Strand=Plus/Minus
Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168
|||| || ||||| || || || |||||||| || |||||||||||||| ||||| |
Sbjct 3061 TTCCACCCCTCAGCCTTAAAACTAGGTGAAGAGTTGACTCCTTTTGGATGTCATAATCTG 3002
Query 44169 C--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||||| | | || |||| ||||| |||||||| ||||| | ||| ||||| |
Sbjct 3001 CAAGAGTT--CTTCCATCTTCCAATTGCTTACCGGCAAAAATCAATCTCTGTTGATCAGG 2944
Query 44227 AGGCACACCTTCCTTTTCC 44245
||| | |||||||| |||
Sbjct 2943 AGGGATGCCTTCCTTATCC 2925
>seq176225
Length=1588
Score = 82.4 bits (90), Expect = 5e-11
Identities = 150/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCT----CG 44182
|||| || ||| ||| ||| || ||||||||||| || | ||| | | | |
Sbjct 1305 ACCAAGTAAAGGGTGGACTCATTCTGGATGTTGTAGGAAGCAAGTGTTCGAGTTCCACCA 1364
Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242
|| || || ||||| || |||||||||| || |||||| |||| || | ||||||||
Sbjct 1365 TCCTCAAGTTGCTTGCCAGCAAAGATCAGACACTGCTGGTCTGGGGGAATGCCTTCCTTG 1424
Query 44243 TCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301
| | ||| | || | || ||| | ||||||||| | || |||||||||| ||
Sbjct 1425 TGCTGGATCGT-GGCCTTAACGTTGTCAATGGTGTCGCCAGACTCCACCTCCAGGTCGAT 1483
Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || | ||||| ||||| || |||| |||
Sbjct 1484 AGTCTTGCCAGCAAGGGTTTTCACAAAAATTTTCAT 1519
>seq55328
Length=456
Score = 82.4 bits (90), Expect = 5e-11
Identities = 90/118 (76%), Gaps = 4/118 (3%)
Strand=Plus/Minus
Query 44114 CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GA 44171
|| || || |||||||||| |||||| || |||||||| |||||||||||| || ||
Sbjct 119 CCCCTTAGCCTCAACACCAAGTGAAGAGTCGACTCCTTTTAGATGTTGTAATCCGCAAGA 60
Query 44172 GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
||| | | | || |||| || || || |||||||||| | ||| ||||||| |||
Sbjct 59 GTT--CTCCCATCTTCCAATTGTTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAGG 4
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359047007357808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |