Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq203618 120 4e-22 >seq203618 Length=3964 Score = 120 bits (132), Expect = 4e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 80088 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 80147 |||| ||| |||||||| | || | || || | |||| |||||| || ||| ||||| Sbjct 892 TTTGCCTCCCCCCTGATCAACATAACGGGCAGTATCATTAAAAACTCGCAGCATAGGAAT 833 Query 80148 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACT 80207 || ||||||||||| ||||| || || ||||| || ||| |||||||||| || Sbjct 832 GATGCCATTGGATGTCCCATTTGTTCCACGAATATAACTGCCAGTGGCACGAATGTTGTG 773 Query 80208 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 80267 || || | ||| |||||||| || ||| ||| | || ||| || || ||||| Sbjct 772 AACAGAGACACCAATTCCCCCAGCTGATTTGCTGATGACAGCACATTCCTTCAAGGTATC 713 Query 80268 ATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTA 80316 ||| ||||| || ||||||||||| ||||| | || || |||||| Sbjct 712 ATATATGCCTTCAATGCTATCATCTTTCATGCATACAAGGAAGCAGCTA 664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716376341279200