Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq155400 152 1e-31 seq186836 140 7e-28 seq165785 140 7e-28 seq7966 136 9e-27 seq1224 131 4e-25 seq6123 129 1e-24 seq171660 123 6e-23 seq150930 118 2e-21 seq520 118 2e-21 seq117973 116 8e-21 seq58964 113 1e-19 seq115308 109 1e-18 seq59837 107 4e-18 seq13283 104 5e-17 seq48558 100 7e-16 seq2159 96.9 8e-15 seq200298 93.3 1e-13 >seq155400 Length=901 Score = 152 bits (168), Expect = 1e-31 Identities = 174/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | || || || | || || || || || || || || || | Sbjct 460 TTCCTCCCCTGAGCCTCAACACCAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCG 519 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 |||||||| || ||||| ||||| || |||||||| || || ||||||||||| |||| Sbjct 520 CAAGAGTTCTGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAG 579 Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTA 104510 | || |||||||| ||||| ||||| ||||| ||||| || | |||||| || || | Sbjct 580 GGATGCCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCACTGCTCTCGA 639 Query 104511 CCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 |||| | || || ||||| || || || ||||| || || || ||||| |||| Sbjct 640 CCTCAATAGTGATGGTCTTCCCGGTCAGAGTTTTCACGAAAATTTGCATATTGT 693 >seq186836 Length=3669 Score = 140 bits (154), Expect = 7e-28 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || || || | || || || ||||| ||||| ||||| | || || | Sbjct 699 AGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCTGCGAGGGTCCGG 758 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| ||||| || ||||||||||| || ||||| || || || Sbjct 759 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGGTCTGGAGGGATGCCCTCC 818 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||| ||||| ||||| || || || | ||| ||| || | |||||||| || || Sbjct 819 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCTACCTCGAGGGT 877 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || || |||||||| |||||||| Sbjct 878 GATGGTCTTGCCGGTTAGGGTCTTTACAAAGATCTGCAT 916 >seq165785 Length=1301 Score = 140 bits (154), Expect = 7e-28 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || || || | || || || ||||| ||||| ||||||| || || | Sbjct 1248 AGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCAGCGAGGGTCCGG 1189 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| ||||| || |||||||||||||| ||||| || || || Sbjct 1188 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGGGATGCCCTCC 1129 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||| ||||| ||||| || || || | ||| ||| || | || ||||| || || Sbjct 1128 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCCACCTCGAGGGT 1070 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||| || ||||| || || ||||| |||||||| Sbjct 1069 GACGGTCTTGCCGGTAAGCGTCTTCACAAAGATCTGCAT 1031 >seq7966 Length=1209 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || |||||||| || || || | ||||| || || || Sbjct 656 AAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATC 715 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || |||||||| || || |||||||| || || || || || || || ||||| Sbjct 716 CTCAAGCTGCTTTCCAGCGAATATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 775 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| ||||| ||||| || | ||||| | |||||||| | ||| || || Sbjct 776 CTGAATCTTGGCTTTCACATTGTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGGT 835 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || ||||| ||||| |||||||| Sbjct 836 CTTCCCTGTCAGAGTTTTGACAAAGATCTGCAT 868 Score = 114 bits (126), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || |||||||||||||| | || || || || || || || || || || Sbjct 900 GTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTTCCATCCTCAAGCTGCTTACCT 959 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | |||||| || || || || || || || ||||||||||| || ||||| Sbjct 960 GCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATTTTAGCTTTC 1019 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| |||| ||| || ||| ||| || || | || || || || || ||||| Sbjct 1020 ACATTATCTATGGTGTCAGAGCT---TTCCACTTCCAAAGTGATGGTTTTGCCGGTAAGG 1076 Query 104540 GTTTTTACAAATATCTGCAT 104559 || || ||||| || ||||| Sbjct 1077 GTCTTGACAAAGATTTGCAT 1096 >seq1224 Length=2434 Score = 131 bits (144), Expect = 4e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | ||| | ||||| || ||||| ||||| || || | ||||| || Sbjct 1911 AGCCTGAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTG 1970 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || | ||| |||||||| || || | |||||| ||||| || || || ||||| Sbjct 1971 CCATCCTCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCC 2030 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 |||||||| ||||| || || || || || | |||||| || | || ||||| || || Sbjct 2031 TTATCCTGGATCTTGGCCTTGACGTTATCAATTGTATCGG-AGCTCTCAACCTCCAGGGT 2089 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || | || || || ||||||||||| Sbjct 2090 AATGGTCTTCCCTGTCAAAGTCTTCACGAATATCTGCAT 2128 >seq6123 Length=1345 Score = 129 bits (142), Expect = 1e-24 Identities = 162/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || || |||| || ||||| || |||||||| ||||||| || || | Sbjct 972 AGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGT 913 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || || |||||||||||||| || || || || || || || || ||||| Sbjct 912 CCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCC 853 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 ||||| || || || ||||| ||||| || | ||| || ||| ||| ||||| || Sbjct 852 TTATCTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---TTCAACCTCAAGG 796 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| ||||| || || || || || |||||||| Sbjct 795 GTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 755 Score = 113 bits (124), Expect = 1e-19 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | ||| |||| ||| | || || || || ||||| || || ||| Sbjct 1212 ATGCCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCA 1153 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || || || || || |||||||| || || ||||| || || || Sbjct 1152 GCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGT 1093 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || |||||||||||||||||||| || || || || | ||| || | || Sbjct 1092 GGGATACCCTCTTTATCCTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCA 1033 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || || || || ||||| || || || ||||| || ||||| Sbjct 1032 ACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 983 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 104425 AAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTAC 104484 |||||| |||||||| || || ||||| || || || || |||||||||||||| || || Sbjct 1345 AAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTGAC 1286 Query 104485 ATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544 ||| || | ||||| | ||| ||||| | || || ||||| || || || || || Sbjct 1285 ATTATCAATTGTATCTGAACTTTCAACCTCCAAGGTGATTGTCTTTCCGGTGAGGGTCTT 1226 Query 104545 TACAAATATCTGCAT 104559 ||||| || ||||| Sbjct 1225 GACAAAGATTTGCAT 1211 >seq171660 Length=1062 Score = 123 bits (136), Expect = 6e-23 Identities = 148/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||| || || || ||||||| || || | ||||| || || || || ||| Sbjct 392 GTGGACTCTTTTTGGATGTTGTAGTCAGCGAGTGTCCGCCCGTCCTCAAGCTGCTTGCCA 333 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||| ||||| || || || ||||| || || || || ||||||||||| Sbjct 332 GCAAAGATCAGCCTTTGTTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTTGCTTTG 273 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | || || ||| ||| ||||| || || || ||||| || || || Sbjct 272 ACATTGTCAATAGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCTGTGAGG 216 Query 104540 GTTTTTACAAATATCTGCAT 104559 ||||| ||||| |||||||| Sbjct 215 GTTTTCACAAAGATCTGCAT 196 >seq150930 Length=8867 Score = 118 bits (130), Expect = 2e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | ||||| || ||||| ||||| ||||| | ||| || | || || Sbjct 894 AAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCCATC 835 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || ||||| || |||||||| || || || || || ||||| || || Sbjct 834 CTCAAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 775 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||||||||| || || || || || | ||| || || | || ||||| || || || | Sbjct 774 CTGAATCTTAGCCTTGACGTTGTCAATGGTGTC-AGAGCTCTCGACCTCAAGGGTGATGG 716 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| ||||| | || || ||||| |||||||| Sbjct 715 TCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 682 Score = 113 bits (124), Expect = 1e-19 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || ||||| ||||| || || ||||||| || || | || || Sbjct 1350 AAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCATC 1291 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || ||||||||||| || |||||||| || || || || || || || || || Sbjct 1290 CTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTC 1231 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||| ||||| || || ||||| || | ||| || || | || ||||| | || || | Sbjct 1230 CTGGATCTTAGCCTTCACATTGTCGATGGTGTC-TGAGCTCTCCACCTCCAAGGTGATGG 1172 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| ||||| | || || ||||| |||||||| Sbjct 1171 TCTTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 1138 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || || || ||||| ||||| || |||| || || | || || Sbjct 666 AAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCAAGGGTCCGGCCATC 607 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || |||||||| || || | ||| || || || || ||||| || || || Sbjct 606 CTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTC 547 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || || || || | ||| || || || ||||| || || ||||| Sbjct 546 CTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGT 487 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || ||||| || || || ||||| Sbjct 486 CTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 454 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || ||||| ||||| || || || || | || || | || || Sbjct 1122 AAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATC 1063 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || ||||| ||||| || |||||||| || || || || || || || || || Sbjct 1062 CTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTC 1003 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || ||||| || | ||| || || || ||||| || || || || Sbjct 1002 CTGAATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGT 943 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || | || || || || |||||||| Sbjct 942 CTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 910 >seq520 Length=4969 Score = 118 bits (130), Expect = 2e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||||| || || ||||| | | || | ||||| || || || ||||| || || | Sbjct 2010 CTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGA 1951 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | || | ||| ||||||||||| || ||||| || || || ||||| || || ||||| | Sbjct 1950 TGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTTTCTTGGATCTTGGCCTTGACATTGT 1891 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | ||| ||||| || ||||| || || || ||||| || || || ||||| || | Sbjct 1890 CGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGA 1831 Query 104550 ATATCTGCATTTT 104562 |||||||||| || Sbjct 1830 ATATCTGCATCTT 1818 >seq117973 Length=1091 Score = 116 bits (128), Expect = 8e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | || || || || | || || ||||| || ||||| || || Sbjct 934 ATTCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCT 875 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || ||||| ||||| || ||||| || |||||||| ||||| || Sbjct 874 GCGAGTGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGG 815 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || || |||||||||||||| || ||||| || | || || || | || Sbjct 814 GGGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTC-AGAGCTCTC 756 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||| || ||||| || || || || || ||||| |||||||| Sbjct 755 AACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 705 Score = 113 bits (124), Expect = 1e-19 Identities = 123/162 (76%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || | ||||| || ||||| || |||||||| ||||| || || || || || Sbjct 1090 CCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCC 1031 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || ||||| ||||||||||| ||||| || | ||||| ||| ||| ||||| | | Sbjct 1030 TTGTCCTGGATCTTTGCTTTAACATTGTCAATTGTATCAGAGCT---TTCCACCTCCAAT 974 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || ||||| |||||||| || || ||||| || |||||| Sbjct 973 GTGATTGTCTTCCCAGTAAGGGTCTTCACAAAGATTTGCATT 932 >seq58964 Length=436 Score = 113 bits (124), Expect = 1e-19 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || | ||| | || || ||||||||||| || || || Sbjct 98 ATCCCACCACGTAGACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCT 157 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || || ||||| || || || ||||| ||||| || |||||||| || || || Sbjct 158 GCCAGTGTCCTGCCGTCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGG 217 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || || |||||||| |||||||||||||| || || || || | || || ||| | Sbjct 218 GGAATGCCTTCTTTGTCCTGAATCTTTGCCTTGACGTTATCAATTGTGTCTGAGCT---T 274 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || | ||||| || || || || | || || ||||| || |||||| Sbjct 275 TCCACTTCCAAAGTAATGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCATT 328 >seq115308 Length=3903 Score = 109 bits (120), Expect = 1e-18 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | |||||| || ||||| || ||||| || | ||||| | || || Sbjct 3578 AAGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTATAATCTGCGAGAGTGCGGCCATC 3637 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | || || || || || || |||||||| || || || || || || || || || Sbjct 3638 CTCCAACTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 3697 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||| ||||| || || || || || | ||| ||| || | || ||||| || || || | Sbjct 3698 CTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGG-AGCTCTCCACCTCGAGGGTGATGG 3756 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || || || ||||| || ||||||||||| Sbjct 3757 TCTTGCCCGTTAGGGTTTTCACGAATATCTGCAT 3790 >seq59837 Length=433 Score = 107 bits (118), Expect = 4e-18 Identities = 165/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || | ||| | || || || ||||| || || || || Sbjct 336 ATCCCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCT 277 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || ||||| || || || || ||||| ||||| || |||||||| || || || Sbjct 276 GCCAGTGTCCTACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGG 217 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || || |||||||| ||||||||||| || || ||||| || | || || ||| | Sbjct 216 GGAATGCCTTCTTTGTCCTGAATCTTCGCCTTGACATTATCAATTGTGTCTGAGCT---T 160 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || | |||||||| || || || | || || ||||| || |||||| Sbjct 159 TCCACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 106 >seq13283 Length=967 Score = 104 bits (114), Expect = 5e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| |||| || || || || | ||||| ||| || ||||||||||| || Sbjct 831 GTTGATTCCGTCTGGATGTTGTAATCTGCAAGAGTGTGACCATCCTCTAGTTGTTTCCCT 890 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| |||||||| || || ||||| || || || || |||||||||||||| || Sbjct 891 GCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTG 950 Query 104483 ACATTTTCTACGGTATC 104499 ||||| || | ||||| Sbjct 951 ACATTATCAATTGTATC 967 Score = 100 bits (110), Expect = 7e-16 Identities = 143/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || |||||||||||||||| || || || || || || || || || || Sbjct 603 GTGGACTCCTTTTGAATATTATAGTCAGCAAGTGTCCTTCCATCCTCAAGCTGCTTGCCT 662 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | |||||| || || || || || || || || || ||||| || ||||| Sbjct 663 GCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATTTTAGCTTTC 722 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| || | ||| || ||| ||| || || | | || || || || ||||| Sbjct 723 ACATTATCAATGGTGTCAGAGCT---TTCCACTTCCACAATGATGGTTTTGCCGGTAAGG 779 Query 104540 GTTTTTACAAATATCTGCAT 104559 || || ||||| || ||||| Sbjct 780 GTCTTGACAAAGATTTGCAT 799 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || || || | ||||| | || || || || || |||||||| || Sbjct 383 TCCTTCTGAATGTTGTAATCTGCAAGAGTCCACCCATCCTCGAGCTGCTTTCCAGCGAAT 442 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || ||||| ||||| || | ||| || | || || ||||||||||| ||||| ||||| Sbjct 443 ATGAGCCTTTGTTGGTCCGAAGGGATGC--TCCTTGTCCTGAATCTTAGCTTTCACATTG 500 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||||| | |||||||| | ||| || ||||| | || | |||| ||| Sbjct 501 TCAATTGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTTCTTGTCAACATTTTGACA 560 Query 104549 AATATCTGCAT 104559 || || ||||| Sbjct 561 AAGATTTGCAT 571 >seq48558 Length=489 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || || || | |||||||| || || ||||| ||||||| || | | Sbjct 344 AGTCTGAGCACCAGGTGAAGGGTAGATTCCTTTTGGATATTGTAGTCAGCCAGGGCGCGG 285 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || || || |||||||| || || ||||| || || || || || |||||| Sbjct 284 CCATCCTCAAGCTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCTTCT 225 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 ||||| || |||||||| || || || || | ||| || | || ||||| | || Sbjct 224 TTATCTTGGATCTTTGCCTTCACGTTGTCAATGGTGTCAAAACTCTCAACCTCCAAGGTT 165 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||| | || || || ||||| || || || Sbjct 164 ATGGTTTTCCCAATGAGAGTCTTCACAAAGATTTGTAT 127 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 104425 AAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTAC 104484 |||||| |||||||| || || ||||| || || || || |||||||||||||| || || Sbjct 489 AAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTGAC 430 Query 104485 ATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544 ||| || | ||||| | || ||||| | || || |||||||| || || || || Sbjct 429 ATTATCAATTGTATCAGAACTCTCAACCTCCAAAGTGATTGTCTTACCGGTGAGGGTCTT 370 Query 104545 TACAAATATCTGCAT 104559 ||||| || ||||| Sbjct 369 AACAAAGATTTGCAT 355 >seq2159 Length=1969 Score = 96.9 bits (106), Expect = 8e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || | ||| | ||||| || | || || || || || || || || || | Sbjct 1403 TTCCACCCCTCAACCTTAAAACTAGGTGAAGAGTTGACTCCTTTTGGATGTTGTAATCTG 1462 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 |||||||| || ||||| | ||| || || |||||||| | |||||||||||||||| Sbjct 1463 CAAGAGTTCTTCCATCTTCCAATTGCTTACCGGCAAAAATCAATCTCTGTTGATCAGGAG 1522 Query 104451 GTATTCCTTCTTTATCCTGAA 104471 | || ||||| |||||||||| Sbjct 1523 GGATGCCTTCCTTATCCTGAA 1543 >seq200298 Length=1237 Score = 93.3 bits (102), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 104328 TTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGT 104387 || |||| || || | ||| | || || || | || || ||||| || |||||||| | Sbjct 587 TTGTTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAAT 646 Query 104388 CAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAG 104447 | | || |||| ||| ||||| | || || ||||||||||| || ||||| ||||| | Sbjct 647 CTGCAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTG 706 Query 104448 GAGGTATTCCTTCTTTATCCTGAA 104471 |||| || ||||| || ||||||| Sbjct 707 GAGGGATGCCTTCCTTGTCCTGAA 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1148288911892240