Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06]
210,780 sequences; 203,686,407 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq155400 152 1e-31
seq186836 140 7e-28
seq165785 140 7e-28
seq7966 136 9e-27
seq1224 131 4e-25
seq6123 129 1e-24
seq171660 123 6e-23
seq150930 118 2e-21
seq520 118 2e-21
seq117973 116 8e-21
seq58964 113 1e-19
seq115308 109 1e-18
seq59837 107 4e-18
seq13283 104 5e-17
seq48558 100 7e-16
seq2159 96.9 8e-15
seq200298 93.3 1e-13
>seq155400
Length=901
Score = 152 bits (168), Expect = 1e-31
Identities = 174/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || ||||| | || || || | || || || || || || || || || |
Sbjct 460 TTCCTCCCCTGAGCCTCAACACCAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCG 519
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
|||||||| || ||||| ||||| || |||||||| || || ||||||||||| ||||
Sbjct 520 CAAGAGTTCTGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAG 579
Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTA 104510
| || |||||||| ||||| ||||| ||||| ||||| || | |||||| || || |
Sbjct 580 GGATGCCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCACTGCTCTCGA 639
Query 104511 CCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564
|||| | || || ||||| || || || ||||| || || || ||||| ||||
Sbjct 640 CCTCAATAGTGATGGTCTTCCCGGTCAGAGTTTTCACGAAAATTTGCATATTGT 693
>seq186836
Length=3669
Score = 140 bits (154), Expect = 7e-28
Identities = 164/219 (75%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || || || | || || || ||||| ||||| ||||| | || || |
Sbjct 699 AGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCTGCGAGGGTCCGG 758
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
||||| || || || ||||| ||||| || ||||||||||| || ||||| || || ||
Sbjct 759 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGGTCTGGAGGGATGCCCTCC 818
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520
|| ||||| ||||| ||||| || || || | ||| ||| || | |||||||| || ||
Sbjct 819 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCTACCTCGAGGGT 877
Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| || || || || |||||||| ||||||||
Sbjct 878 GATGGTCTTGCCGGTTAGGGTCTTTACAAAGATCTGCAT 916
>seq165785
Length=1301
Score = 140 bits (154), Expect = 7e-28
Identities = 164/219 (75%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || || || | || || || ||||| ||||| ||||||| || || |
Sbjct 1248 AGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCAGCGAGGGTCCGG 1189
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
||||| || || || ||||| ||||| || |||||||||||||| ||||| || || ||
Sbjct 1188 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGGGATGCCCTCC 1129
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520
|| ||||| ||||| ||||| || || || | ||| ||| || | || ||||| || ||
Sbjct 1128 TTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCCACCTCGAGGGT 1070
Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| ||||| || ||||| || || ||||| ||||||||
Sbjct 1069 GACGGTCTTGCCGGTAAGCGTCTTCACAAAGATCTGCAT 1031
>seq7966
Length=1209
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || || |||||||| || || || | ||||| || || ||
Sbjct 656 AAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATC 715
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || |||||||| || || |||||||| || || || || || || || |||||
Sbjct 716 CTCAAGCTGCTTTCCAGCGAATATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 775
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| ||||| ||||| || | ||||| | |||||||| | ||| || ||
Sbjct 776 CTGAATCTTGGCTTTCACATTGTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGGT 835
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || ||||| ||||| ||||||||
Sbjct 836 CTTCCCTGTCAGAGTTTTGACAAAGATCTGCAT 868
Score = 114 bits (126), Expect = 3e-20
Identities = 146/200 (73%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || |||||||||||||| | || || || || || || || || || ||
Sbjct 900 GTGGACTCCTTTTGAATATTATAGTCTGCAAGTGTCCTTCCATCCTCAAGCTGCTTACCT 959
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | |||||| || || || || || || || ||||||||||| || |||||
Sbjct 960 GCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATTTTAGCTTTC 1019
Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539
||||| |||| ||| || ||| ||| || || | || || || || || |||||
Sbjct 1020 ACATTATCTATGGTGTCAGAGCT---TTCCACTTCCAAAGTGATGGTTTTGCCGGTAAGG 1076
Query 104540 GTTTTTACAAATATCTGCAT 104559
|| || ||||| || |||||
Sbjct 1077 GTCTTGACAAAGATTTGCAT 1096
>seq1224
Length=2434
Score = 131 bits (144), Expect = 4e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || | ||| | ||||| || ||||| ||||| || || | ||||| ||
Sbjct 1911 AGCCTGAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTG 1970
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || | ||| |||||||| || || | |||||| ||||| || || || |||||
Sbjct 1971 CCATCCTCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCC 2030
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520
|||||||| ||||| || || || || || | |||||| || | || ||||| || ||
Sbjct 2031 TTATCCTGGATCTTGGCCTTGACGTTATCAATTGTATCGG-AGCTCTCAACCTCCAGGGT 2089
Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| ||||| || || | || || || |||||||||||
Sbjct 2090 AATGGTCTTCCCTGTCAAAGTCTTCACGAATATCTGCAT 2128
>seq6123
Length=1345
Score = 129 bits (142), Expect = 1e-24
Identities = 162/221 (73%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|| || || || || |||| || ||||| || |||||||| ||||||| || || |
Sbjct 972 AGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGT 913
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || || || |||||||||||||| || || || || || || || || |||||
Sbjct 912 CCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCC 853
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518
||||| || || || ||||| ||||| || | ||| || ||| ||| ||||| ||
Sbjct 852 TTATCTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---TTCAACCTCAAGG 796
Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || ||||| ||||| || || || || || ||||||||
Sbjct 795 GTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 755
Score = 113 bits (124), Expect = 1e-19
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | ||| |||| ||| | || || || || ||||| || || |||
Sbjct 1212 ATGCCACCACGTAGACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCA 1153
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || || || || || |||||||| || || ||||| || || ||
Sbjct 1152 GCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGT 1093
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || |||||||||||||||||||| || || || || | ||| || | ||
Sbjct 1092 GGGATACCCTCTTTATCCTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCA 1033
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | || || || || ||||| || || || ||||| || |||||
Sbjct 1032 ACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 983
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 104425 AAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTAC 104484
|||||| |||||||| || || ||||| || || || || |||||||||||||| || ||
Sbjct 1345 AAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTGAC 1286
Query 104485 ATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544
||| || | ||||| | ||| ||||| | || || ||||| || || || || ||
Sbjct 1285 ATTATCAATTGTATCTGAACTTTCAACCTCCAAGGTGATTGTCTTTCCGGTGAGGGTCTT 1226
Query 104545 TACAAATATCTGCAT 104559
||||| || |||||
Sbjct 1225 GACAAAGATTTGCAT 1211
>seq171660
Length=1062
Score = 123 bits (136), Expect = 6e-23
Identities = 148/200 (74%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || ||||| || || || ||||||| || || | ||||| || || || || |||
Sbjct 392 GTGGACTCTTTTTGGATGTTGTAGTCAGCGAGTGTCCGCCCGTCCTCAAGCTGCTTGCCA 333
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || ||||| ||||| || || || ||||| || || || || |||||||||||
Sbjct 332 GCAAAGATCAGCCTTTGTTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTTGCTTTG 273
Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539
||||| || | || || ||| ||| ||||| || || || ||||| || || ||
Sbjct 272 ACATTGTCAATAGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTGCCTGTGAGG 216
Query 104540 GTTTTTACAAATATCTGCAT 104559
||||| ||||| ||||||||
Sbjct 215 GTTTTCACAAAGATCTGCAT 196
>seq150930
Length=8867
Score = 118 bits (130), Expect = 2e-21
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| | ||||| || ||||| ||||| ||||| | ||| || | || ||
Sbjct 894 AAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCCATC 835
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || || ||||| || |||||||| || || || || || ||||| || ||
Sbjct 834 CTCAAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 775
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||||||||| || || || || || | ||| || || | || ||||| || || || |
Sbjct 774 CTGAATCTTAGCCTTGACGTTGTCAATGGTGTC-AGAGCTCTCGACCTCAAGGGTGATGG 716
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||| ||||| | || || ||||| ||||||||
Sbjct 715 TCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 682
Score = 113 bits (124), Expect = 1e-19
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| | || ||||| ||||| || || ||||||| || || | || ||
Sbjct 1350 AAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCATC 1291
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || ||||||||||| || |||||||| || || || || || || || || ||
Sbjct 1290 CTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTC 1231
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||| ||||| || || ||||| || | ||| || || | || ||||| | || || |
Sbjct 1230 CTGGATCTTAGCCTTCACATTGTCGATGGTGTC-TGAGCTCTCCACCTCCAAGGTGATGG 1172
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||| ||||| | || || ||||| ||||||||
Sbjct 1171 TCTTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 1138
Score = 109 bits (120), Expect = 1e-18
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| | || || || ||||| ||||| || |||| || || | || ||
Sbjct 666 AAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCAAGGGTCCGGCCATC 607
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || |||||||| || || | ||| || || || || ||||| || || ||
Sbjct 606 CTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTC 547
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| || || || || || | ||| || || || ||||| || || |||||
Sbjct 546 CTGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGT 487
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || ||||| || || || |||||
Sbjct 486 CTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 454
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| | || ||||| ||||| || || || || | || || | || ||
Sbjct 1122 AAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATC 1063
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || ||||| ||||| || |||||||| || || || || || || || || ||
Sbjct 1062 CTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTC 1003
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| || || ||||| || | ||| || || || ||||| || || || ||
Sbjct 1002 CTGAATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGT 943
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || | || || || || ||||||||
Sbjct 942 CTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 910
>seq520
Length=4969
Score = 118 bits (130), Expect = 2e-21
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429
||||||| || || ||||| | | || | ||||| || || || ||||| || || |
Sbjct 2010 CTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGA 1951
Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489
| || | ||| ||||||||||| || ||||| || || || ||||| || || ||||| |
Sbjct 1950 TGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTTTCTTGGATCTTGGCCTTGACATTGT 1891
Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549
| | ||| ||||| || ||||| || || || ||||| || || || ||||| || |
Sbjct 1890 CGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGA 1831
Query 104550 ATATCTGCATTTT 104562
|||||||||| ||
Sbjct 1830 ATATCTGCATCTT 1818
>seq117973
Length=1091
Score = 116 bits (128), Expect = 8e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | || || || || | || || ||||| || ||||| || ||
Sbjct 934 ATTCCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCT 875
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || ||||| ||||| || ||||| || |||||||| ||||| ||
Sbjct 874 GCGAGTGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGG 815
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || |||||||||||||| || ||||| || | || || || | ||
Sbjct 814 GGGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTC-AGAGCTCTC 756
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | ||| || ||||| || || || || || ||||| ||||||||
Sbjct 755 AACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 705
Score = 113 bits (124), Expect = 1e-19
Identities = 123/162 (76%), Gaps = 6/162 (4%)
Strand=Plus/Minus
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
||||| || | ||||| || ||||| || |||||||| ||||| || || || || ||
Sbjct 1090 CCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCC 1031
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518
|| ||||| ||||||||||| ||||| || | ||||| ||| ||| ||||| | |
Sbjct 1030 TTGTCCTGGATCTTTGCTTTAACATTGTCAATTGTATCAGAGCT---TTCCACCTCCAAT 974
Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || ||||| |||||||| || || ||||| || ||||||
Sbjct 973 GTGATTGTCTTCCCAGTAAGGGTCTTCACAAAGATTTGCATT 932
>seq58964
Length=436
Score = 113 bits (124), Expect = 1e-19
Identities = 166/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || | ||| | || || ||||||||||| || || ||
Sbjct 98 ATCCCACCACGTAGACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCT 157
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || || ||||| || || || ||||| ||||| || |||||||| || || ||
Sbjct 158 GCCAGTGTCCTGCCGTCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGG 217
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506
|| || |||||||| |||||||||||||| || || || || | || || ||| |
Sbjct 218 GGAATGCCTTCTTTGTCCTGAATCTTTGCCTTGACGTTATCAATTGTGTCTGAGCT---T 274
Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || | ||||| || || || || | || || ||||| || ||||||
Sbjct 275 TCCACTTCCAAAGTAATGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCATT 328
>seq115308
Length=3903
Score = 109 bits (120), Expect = 1e-18
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | |||||| || ||||| || ||||| || | ||||| | || ||
Sbjct 3578 AAGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTATAATCTGCGAGAGTGCGGCCATC 3637
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| | || || || || || || |||||||| || || || || || || || || ||
Sbjct 3638 CTCCAACTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 3697
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||| ||||| || || || || || | ||| ||| || | || ||||| || || || |
Sbjct 3698 CTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGG-AGCTCTCCACCTCGAGGGTGATGG 3756
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||| || || || ||||| || |||||||||||
Sbjct 3757 TCTTGCCCGTTAGGGTTTTCACGAATATCTGCAT 3790
>seq59837
Length=433
Score = 107 bits (118), Expect = 4e-18
Identities = 165/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || | ||| | || || || ||||| || || || ||
Sbjct 336 ATCCCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCT 277
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || ||||| || || || || ||||| ||||| || |||||||| || || ||
Sbjct 276 GCCAGTGTCCTACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGG 217
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506
|| || |||||||| ||||||||||| || || ||||| || | || || ||| |
Sbjct 216 GGAATGCCTTCTTTGTCCTGAATCTTCGCCTTGACATTATCAATTGTGTCTGAGCT---T 160
Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || | |||||||| || || || | || || ||||| || ||||||
Sbjct 159 TCCACTTCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 106
>seq13283
Length=967
Score = 104 bits (114), Expect = 5e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| |||| || || || || | ||||| ||| || ||||||||||| ||
Sbjct 831 GTTGATTCCGTCTGGATGTTGTAATCTGCAAGAGTGTGACCATCCTCTAGTTGTTTCCCT 890
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| |||||||| || || ||||| || || || || |||||||||||||| ||
Sbjct 891 GCAAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTG 950
Query 104483 ACATTTTCTACGGTATC 104499
||||| || | |||||
Sbjct 951 ACATTATCAATTGTATC 967
Score = 100 bits (110), Expect = 7e-16
Identities = 143/200 (72%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || |||||||||||||||| || || || || || || || || || ||
Sbjct 603 GTGGACTCCTTTTGAATATTATAGTCAGCAAGTGTCCTTCCATCCTCAAGCTGCTTGCCT 662
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | |||||| || || || || || || || || || ||||| || |||||
Sbjct 663 GCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATTTTAGCTTTC 722
Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539
||||| || | ||| || ||| ||| || || | | || || || || |||||
Sbjct 723 ACATTATCAATGGTGTCAGAGCT---TTCCACTTCCACAATGATGGTTTTGCCGGTAAGG 779
Query 104540 GTTTTTACAAATATCTGCAT 104559
|| || ||||| || |||||
Sbjct 780 GTCTTGACAAAGATTTGCAT 799
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/191 (72%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| |||||||| || || || | ||||| | || || || || || |||||||| ||
Sbjct 383 TCCTTCTGAATGTTGTAATCTGCAAGAGTCCACCCATCCTCGAGCTGCTTTCCAGCGAAT 442
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| ||||| ||||| || | ||| || | || || ||||||||||| ||||| |||||
Sbjct 443 ATGAGCCTTTGTTGGTCCGAAGGGATGC--TCCTTGTCCTGAATCTTAGCTTTCACATTG 500
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | ||||| | |||||||| | ||| || ||||| | || | |||| |||
Sbjct 501 TCAATTGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTTCTTGTCAACATTTTGACA 560
Query 104549 AATATCTGCAT 104559
|| || |||||
Sbjct 561 AAGATTTGCAT 571
>seq48558
Length=489
Score = 100 bits (110), Expect = 7e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|| || || || || || | |||||||| || || ||||| ||||||| || | |
Sbjct 344 AGTCTGAGCACCAGGTGAAGGGTAGATTCCTTTTGGATATTGTAGTCAGCCAGGGCGCGG 285
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || || || || |||||||| || || ||||| || || || || || ||||||
Sbjct 284 CCATCCTCAAGCTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCTTCT 225
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
||||| || |||||||| || || || || | ||| || | || ||||| | ||
Sbjct 224 TTATCTTGGATCTTTGCCTTCACGTTGTCAATGGTGTCAAAACTCTCAACCTCCAAGGTT 165
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || ||| | || || || ||||| || || ||
Sbjct 164 ATGGTTTTCCCAATGAGAGTCTTCACAAAGATTTGTAT 127
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 104425 AAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTAC 104484
|||||| |||||||| || || ||||| || || || || |||||||||||||| || ||
Sbjct 489 AAAAATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTGAC 430
Query 104485 ATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544
||| || | ||||| | || ||||| | || || |||||||| || || || ||
Sbjct 429 ATTATCAATTGTATCAGAACTCTCAACCTCCAAAGTGATTGTCTTACCGGTGAGGGTCTT 370
Query 104545 TACAAATATCTGCAT 104559
||||| || |||||
Sbjct 369 AACAAAGATTTGCAT 355
>seq2159
Length=1969
Score = 96.9 bits (106), Expect = 8e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || | ||| | ||||| || | || || || || || || || || || |
Sbjct 1403 TTCCACCCCTCAACCTTAAAACTAGGTGAAGAGTTGACTCCTTTTGGATGTTGTAATCTG 1462
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
|||||||| || ||||| | ||| || || |||||||| | ||||||||||||||||
Sbjct 1463 CAAGAGTTCTTCCATCTTCCAATTGCTTACCGGCAAAAATCAATCTCTGTTGATCAGGAG 1522
Query 104451 GTATTCCTTCTTTATCCTGAA 104471
| || ||||| ||||||||||
Sbjct 1523 GGATGCCTTCCTTATCCTGAA 1543
>seq200298
Length=1237
Score = 93.3 bits (102), Expect = 1e-13
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 104328 TTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGT 104387
|| |||| || || | ||| | || || || | || || ||||| || |||||||| |
Sbjct 587 TTGTTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATTATAAT 646
Query 104388 CAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAG 104447
| | || |||| ||| ||||| | || || ||||||||||| || ||||| ||||| |
Sbjct 647 CTGCAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTGATCTG 706
Query 104448 GAGGTATTCCTTCTTTATCCTGAA 104471
|||| || ||||| || |||||||
Sbjct 707 GAGGGATGCCTTCCTTGTCCTGAA 730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1148288911892240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |