Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06]
210,780 sequences; 203,686,407 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq58964 125 6e-24
seq6123 120 3e-22
seq117973 118 9e-22
seq13283 116 3e-21
seq171660 113 4e-20
seq153096 113 4e-20
seq59837 111 1e-19
seq150930 109 5e-19
seq7966 107 2e-18
seq155400 104 2e-17
seq1224 104 2e-17
seq186836 98.7 9e-16
seq2159 84.2 2e-11
>seq58964
Length=436
Score = 125 bits (138), Expect = 6e-24
Identities = 160/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| |||||||||||||| ||| |||| || | |||||||| ||
Sbjct 328 AATGCAAATTTTTGTGAAGACTTTGACCGGGAAAACCATTACTTTGGAAGTGGAAAGCTC 269
Query 25058 TGACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || | || | ||| |||| | ||| ||||||||||| ||||| || |||
Sbjct 268 AGACACAATTGA-TAACGTCAAGGCAAAGATTCAG-GACAAAGAAGGCATTCCCCCAGAC 211
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||| || | || ||||| || || || | || || | | || ||| ||||||
Sbjct 210 CAGCAGAGGCTCATCTTTGCAGGAAAGCAGCTTGAGGACGGCAGGACACTGGCAGATTAC 151
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| ||||| || || || ||||| |||||
Sbjct 150 AACATTCAGAAAGAGTCGACTCTGCATTTGGTGCT 116
>seq6123
Length=1345
Score = 120 bits (132), Expect = 3e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| |||||| | || || ||| |||| || | || || ||| |||
Sbjct 983 ATGCAAATCTTTGTGAAGACTCTCACTGGGAAAACCATAACCTTGGAGGTTGAGAGTTCT 1042
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || ||||| |||| | ||| || ||||| || || ||||| |||||
Sbjct 1043 GACACCATTGACAACGTGAAGGCAAAGATTCAG-GATAAAGAGGGTATCCCACCAGACCA 1101
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | || ||||| || || || | || |||| ||||| ||| ||||||||
Sbjct 1102 GCAGAGACTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTGGCTGATTACAA 1161
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||||| || ||||| || |||||||||||
Sbjct 1162 CATTCAAAAGGAGTCCACCCTTCATTTAGTGCT 1194
Score = 100 bits (110), Expect = 2e-16
Identities = 161/227 (71%), Gaps = 7/227 (3%)
Strand=Plus/Plus
Query 24994 GAACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052
||||| ||||| || || || |||||| | || || || ||||||| | || || ||
Sbjct 749 GAACAGATGCAGATCTTCGTTAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTTGAA 808
Query 25053 TCGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCA 25109
|||||||| ||||| || || |||| |||| || || || ||||| |||||
Sbjct 809 AGCTCTGACACCATCGA--CAATGTCAAAGCCAAAATCCAA-GATAAGGAAGGCATTCCC 865
Query 25110 CCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGC 25169
|| ||||| || | | |||||||| || || || | || |||| ||||| | |
Sbjct 866 CCAGACCAGCAAAGACTGATTTTTGCTGGAAAGCAGCTCGAGGATGGACGCACCCTTGCT 925
Query 25170 GATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
|| |||||||||||||| ||||| || ||||| | ||||| || ||
Sbjct 926 GACTACAATATTCAAAAGGAATCGACTCTACACCTGGTGCTCAGACT 972
>seq117973
Length=1091
Score = 118 bits (130), Expect = 9e-22
Identities = 157/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| | || || || |||||||| | || || ||| |||
Sbjct 705 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGCTCT 764
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| ||||| |||| | ||||| | ||| ||||| || || || || || ||
Sbjct 765 GACACAATCGATAATGTCA---AGGCAAAGATTCAG-GACAAGGAGGGCATCCCCCCAGA 820
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|| ||| || | || |||||||||||||| |||| |||| || || | | |||||
Sbjct 821 TCAGCAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGTACACTCGCAGATTA 880
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||| |||||||| ||||| || || | |||||
Sbjct 881 CAATATCCAAAAAGAGTCCACCCTCCACCTGGTGCT 916
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/225 (69%), Gaps = 5/225 (2%)
Strand=Plus/Plus
Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053
|||| ||||| || ||||| || || | || || || | ||||| |||| || ||
Sbjct 472 AACAGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTTGAAA 531
Query 25054 CGTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111
||||||||||| || || || ||| ||| ||| ||||| || || || || ||
Sbjct 532 GCTCTGACACTATTGA--CAATGTCAAGGCAAAGATCCAAGACAAGGAGGGAATCCCCCC 589
Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171
||||| || || | || ||||| ||||| || | || || | || || | | ||
Sbjct 590 AGACCAGCAAAGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACACTTGCTGA 649
Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
||||| ||||||||||| ||||| || || | ||||| || ||
Sbjct 650 CTACAACATTCAAAAAGAGTCCACCCTCCACCTGGTGCTTAGACT 694
>seq13283
Length=967
Score = 116 bits (128), Expect = 3e-21
Identities = 155/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| | ||||| ||| |||||| || |||||||| |||
Sbjct 799 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAAACCATCATTGTGGAAGTGGAAAGCTCT 740
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || |||| || |||| ||| ||||| || || ||||| || |||||
Sbjct 739 GACACCATTGATAATGTGAAAGCTAAAATTCAA-GACAAGGAGGGTATTCCCCCAGACCA 681
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | |||||||| ||||| || | || |||| | || | | || || ||
Sbjct 680 GCAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAGGATGGAAGGACACTTGCTGACTATAA 621
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||||||| || ||||| || || || |||||
Sbjct 620 TATTCAAAAGGAGTCCACTCTGCACTTGGTGCT 588
>seq171660
Length=1062
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| | || || || |||||||| | || || ||| |||
Sbjct 424 ATGCAGATCTTTGTTAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGTTCT 483
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| || ||||| | ||| ||| ||| ||||| || || || || || || ||
Sbjct 484 GATACAATCGATAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATACCCCCAGATCAG 543
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || |||||||||||||| |||| |||| ||||| | | ||||||||||
Sbjct 544 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGCACCCTTGCCGATTACAAT 603
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || || || || | |||||
Sbjct 604 ATCCAAAAGGAGTCTACTCTTCACCTGGTGCT 635
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/226 (69%), Gaps = 7/226 (3%)
Strand=Plus/Plus
Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053
|||| ||||| || ||||| || || | || || || ||||||| | || || ||
Sbjct 191 AACAGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTTGAGGTTGAAA 250
Query 25054 CGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110
||||||||||| || || || |||| ||| ||| ||||| || || ||||| |
Sbjct 251 GCTCTGACACTATTGA--CAATGTCAAAGC-AAAGATCCAAGACAAGGAGGGAATTCCCC 307
Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170
| |||||||| || | || ||||| ||||| || | || || | || || | | |
Sbjct 308 CGGACCAACAAAGGCTGATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGGACACTCGCTG 367
Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
| ||||| || |||||||| ||||| || || || || || || ||
Sbjct 368 ACTACAACATCCAAAAAGAGTCCACTCTCCACTTGGTTCTCAGACT 413
>seq153096
Length=4879
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || | ||||| || ||||||| |||| || ||| ||
Sbjct 2988 ATGCAAATTTTCGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCC 3047
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || ||| ||||| || || ||||| || |||||
Sbjct 3048 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 3107
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || || ||||| || || || || |||| || ||| ||| ||||||||||
Sbjct 3108 CAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGAACTTTGGCCGATTACAAT 3167
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || ||||| || ||||| |||||
Sbjct 3168 ATCCAGAAGGAGTCCACCCTCCATTTGGTGCT 3199
Score = 113 bits (124), Expect = 4e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||| | ||||| || | ||||| ||||||| ||| ||
Sbjct 3216 ATGCAAATCTTCGTGAAGACTCTCACCGGGAAGACAATCACTCTCGAAGTTGAGAGCTCC 3275
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | || | ||| || ||| || || |||||||| ||||| || ||
Sbjct 3276 GACACGATTGA-TAACGTCAAGGCCAAGATCCAGGATAAGGAAGGGATCCCACCGGATCA 3334
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | ||||| || || || ||||| || |||| | ||| | | ||||||||
Sbjct 3335 GCAGAGGTTGATTTTCGCTGGTAAGCAATTGGAGGATGGCAGGACTCTTGCGGATTACAA 3394
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
||| || || || || || || ||||| ||||| |||||
Sbjct 3395 TATCCAGAAGGAGTCGACTCTGCATTTGGTGCTCAGGCT 3433
Score = 100 bits (110), Expect = 2e-16
Identities = 153/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||||||||| || || ||||||| | || || ||| ||
Sbjct 3444 ATGCAGATTTTTGTGAAGACTTTGACAGGCAAGACCATCACTTTGGAGGTTGAGAGCTCG 3503
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || || || |||| |||| || | || || || |||||||| ||||| ||
Sbjct 3504 GATACCATTGATAATGTCA---AAGCCAAGATCCAG-GATAAGGAAGGGATCCCACCGGA 3559
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| || || | || ||||||||||| || | || || | ||| || ||| |||||
Sbjct 3560 CCAGCAAAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCTGATTA 3619
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| ||||| || || ||||| || || || || ||
Sbjct 3620 CAACATTCAGAAGGAGTCCACCCTTCACTTGGTCCT 3655
>seq59837
Length=433
Score = 111 bits (122), Expect = 1e-19
Identities = 156/217 (72%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| ||||||||||| || ||| | || || | |||||||| ||
Sbjct 106 AATGCAAATCTTTGTGAAGACTTTGACAGGGAAAACTATTACTTTGGAAGTGGAAAGCTC 165
Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
||||| || || |||| | || || | ||| ||||||||||| ||||| || |
Sbjct 166 AGACACAATTGATAATGTCA---AGGCGAAGATTCAG-GACAAAGAAGGCATTCCCCCAG 221
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
|||| ||| || | || ||||| || || || | || |||| | | || ||| ||||
Sbjct 222 ACCAGCAGAGGCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTAGGACACTGGCAGATT 281
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||| || || || || || || || ||||| |||||
Sbjct 282 ACAACATACAGAAGGAGTCAACTCTGCATTTGGTGCT 318
>seq150930
Length=8867
Score = 109 bits (120), Expect = 5e-19
Identities = 155/216 (72%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||||||||| || || ||||||| | || || ||| |||
Sbjct 682 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTCT 741
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || |||| | || || | ||| ||||| ||||| ||||| || ||
Sbjct 742 GACACCATTGACAACGTCA---AGGCTAAGATTCA-GGACAAGGAAGGCATTCCCCCAGA 797
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| ||| || | || |||||||| || || | || |||| ||||| | | || ||
Sbjct 798 CCAGCAGAGGCTCATCTTTGCCGGGAAGCAGCTTGAGGATGGCCGCACCCTAGCAGACTA 857
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||| || || || || || || ||||| |||||
Sbjct 858 CAATATCCAGAAGGAGTCTACCCTCCATTTGGTGCT 893
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| | || || || ||||||| | || |||||| ||
Sbjct 1366 ATGCAGATTTTTGTCAAGACTCTTACAGGGAAGACCATCACCCTTGAGGTGGAGAGCTCA 1425
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || ||||| | || | ||| ||||| || ||||||||||| |||||
Sbjct 1426 GACACCATTGACAATGTGAAGGCCAAGATTCAA-GACAAGGAGGGGATTCCACCAGACCA 1484
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || |||| ||||||||||| || | || |||| || || | | || |||||
Sbjct 1485 GCAGAGGCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGGCGTACCCTCGCAGACTACAA 1544
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||| || || || || || || ||
Sbjct 1545 TATCCAGAAGGAGTCTACCCTTCA 1568
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || | ||||| || | ||||| | || |||||||| |||
Sbjct 454 ATGCAAATTTTCGTGAAAACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCTTCT 513
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| | || | ||| ||||| || || || || || |||||
Sbjct 514 GACACCATTGACAACGTTAAGGCCAAGATTCAG-GACAAGGAGGGAATCCCCCCGGACCA 572
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || ||||| ||||| || | || |||| || || | | ||||||||
Sbjct 573 GCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGGACCCTTGCTGATTACAA 632
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| || || || || || || ||||| |||||
Sbjct 633 TATCCAGAAGGAGTCGACCCTCCATTTGGTGCT 665
>seq7966
Length=1209
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| | ||||| ||| ||||||| | |||||||| |||
Sbjct 1096 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAAACCATCACTTTGGAAGTGGAAAGCTCT 1037
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || |||| || |||| ||| || || || || ||||| || |||||
Sbjct 1036 GACACCATAGATAATGTGAAAGCTAAAATTCAG-GATAAGGAGGGTATTCCCCCAGACCA 978
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | |||||||| || || || | || |||| | || | | || || ||
Sbjct 977 GCAGAGGTTGATTTTTGCAGGTAAGCAGCTTGAGGATGGAAGGACACTTGCAGACTATAA 918
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||||||| || ||||| || || || |||||
Sbjct 917 TATTCAAAAGGAGTCCACTCTGCACTTGGTGCT 885
>seq155400
Length=901
Score = 104 bits (114), Expect = 2e-17
Identities = 164/232 (71%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || ||| ||||||| || ||||||| | || || ||| |
Sbjct 688 ATGCAAATTTTCGTGAAAACTCTGACCGGGAAGACCATCACTATTGAGGTCGAGAGCAGT 629
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || ||||| || || |||| || | || ||||||||||| || || || ||
Sbjct 628 GATACCATCGA--CAATGTCAAAGCCAAGATCCAG-GACAAAGAAGGCATCCCTCCAGAT 572
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||| | | || ||||| ||||| ||| | ||||||| | ||| | | ||||||
Sbjct 571 CAACAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGCAGAACTCTTGCGGATTAC 512
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|| || ||||| || || || || || | ||| | ||||| || |||||||
Sbjct 511 AACATCCAAAAGGAGTCGACTCTTCACCTGGTGTTGAGGCTCAGGGGAGGAA 460
>seq1224
Length=2434
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||||||||| || || ||||||| | || |||||| ||
Sbjct 1900 ATGCAGATCTTTGTGAAGACTTTGACAGGAAAGACCATCACTTTGGAGGTGGAGAGTTCG 1841
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || ||||| |||| |||| || | || || || ||||| || ||||| ||
Sbjct 1840 GATACCATCGATAATGTCA---AAGCCAAGATCCAG-GATAAGGAAGGTATCCCACCGGA 1785
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| ||| || | || ||||| || || || | || |||| ||| || ||| |||||
Sbjct 1784 CCAGCAGAGGTTGATCTTTGCAGGGAAGCAGCTCGAGGATGGTCGTACCCTGGCTGATTA 1725
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||| || || || ||||| || || || || ||
Sbjct 1724 CAATATCCAGAAGGAGTCCACCCTTCACTTGGTCCT 1689
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| ||||| || ||||||||||| || || |||| || | || || ||| ||
Sbjct 2128 ATGCAGATATTCGTGAAGACTTTGACAGGGAAGACCATTACCCTGGAGGTTGAGAGCTCC 2069
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || | || | ||| || ||| || || |||||||| ||||| || ||
Sbjct 2068 GATACAATTGA-TAACGTCAAGGCCAAGATCCAGGATAAGGAAGGGATCCCACCGGATCA 2010
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || || || || || ||||| || |||| | ||| | | ||||||||
Sbjct 2009 GCAGAGGTTGATCTTCGCTGGAAAGCAATTGGAGGATGGCAGGACTCTTGCGGATTACAA 1950
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
||| || || || || || || ||||| ||||| |||||
Sbjct 1949 TATCCAGAAGGAGTCTACCCTCCATTTGGTGCTCAGGCT 1911
>seq186836
Length=3669
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/206 (71%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| | ||||| ||||||||||| || || ||||||| |||| || ||| |||
Sbjct 688 ATGCAGGTTTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTCGAGGTAGAGAGCTCT 629
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || || || || || |||| || | ||| || || || || || || || ||
Sbjct 628 GATACCATTGA--CAATGTCAAAGCCAAGATTCA-AGATAAGGAGGGTATCCCGCCGGAT 572
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| || || | || || ||||| || || || || |||| ||| ||| ||| ||||||
Sbjct 571 CAGCAAAGGTTGATCTTCGCCGGAAAGCAGTTGGAGGATGGTCGTACTTTGGCCGATTAT 512
Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201
||||| || ||||| ||||| || ||
Sbjct 511 AATATCCAGAAAGAGTCCACCCTGCA 486
Score = 93.3 bits (102), Expect = 4e-14
Identities = 155/222 (70%), Gaps = 8/222 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||||||||| | ||||| || ||||||| |||| || ||| ||
Sbjct 916 ATGCAGATCTTTGTAAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTAGAGAGCTCC 857
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| ||||| |||| |||| || ||| ||||| || || || || || ||
Sbjct 856 GACACCATCGACAACGTCA---AAGC-CAAGATCCAGGACAAGGAGGGCATCCCTCCAGA 801
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||||| || | || |||||||| || || | || || | || || | | || ||
Sbjct 800 CCAACAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGGACCCTCGCAGACTA 741
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
|||||| || || || || || || || | ||||| |||||
Sbjct 740 CAATATCCAGAAGGAGTCGACTCTCCACCTCGTGCTCAGGCT 699
>seq2159
Length=1969
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151
|| || ||||| || || ||||| |||||| | | ||||||||||| || ||||| |||
Sbjct 1538 GATAAGGAAGGCATCCCTCCTGATCAACAGAGATTGATTTTTGCCGGTAAGCAATTGGAA 1479
Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211
|||| | ||| | | |||||||| || ||||| || || || || || |||| ||
Sbjct 1478 GATGGAAGAACTCTTGCAGATTACAACATCCAAAAGGAGTCAACTCTTCACCTAGTTTTA 1419
Query 25212 AGGCTAAGAGGAGGAA 25227
||| | || || ||||
Sbjct 1418 AGGTTGAGGGGTGGAA 1403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432214831825700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |