Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06]
210,780 sequences; 203,686,407 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq150930 134 1e-26
seq171660 131 1e-25
seq186836 123 2e-23
seq153096 118 9e-22
seq117973 118 9e-22
seq6123 116 3e-21
seq192635 114 1e-20
seq13283 114 1e-20
seq58964 111 1e-19
seq155400 109 5e-19
seq7966 109 5e-19
seq165785 107 2e-18
seq115308 104 2e-17
seq1224 96.9 3e-15
seq115535 93.3 4e-14
seq59837 93.3 4e-14
seq632 89.7 4e-13
>seq150930
Length=8867
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || || || || || |||| ||||| ||||| | |
Sbjct 910 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACCATCACCCTTGAGGTGGAGTCTTCT 969
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || ||||| |||||||||||||| ||||| || ||
Sbjct 970 GACACCATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 1029
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| |||||||| || ||| | |||||| ||||||| | | |||||||||
Sbjct 1030 CAGAGGCTTATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTGGCAGATTACAAC 1089
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || ||||||||| | ||||| ||
Sbjct 1090 ATCCAGAAGGAATCCACCCTTCATTTGGT 1118
Score = 123 bits (136), Expect = 2e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || ||| | || || || || |||| ||||| ||||| | | |
Sbjct 1366 ATGCAGATTTTTGTCAAGACTCTTACAGGGAAGACCATCACCCTTGAGGTGGAGAGCTCA 1425
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || || ||||||||||||||||| |||||||| || ||
Sbjct 1426 GACACCATTGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGGATTCCACCAGACCAG 1485
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| ||||||||||| ||| | |||||| || ||| || | || |||||
Sbjct 1486 CAGAGGCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGGCGTACCCTCGCAGACTACAAT 1545
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || || || |||
Sbjct 1546 ATCCAGAAGGAGTCTACC 1563
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||||||||| || ||||| | ||||| || || |||| ||||| ||||| |
Sbjct 452 AGATGCAAATTTTCGTGAAAACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCTT 511
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || ||| | ||| | | || || ||||| ||||||||||| || || || || |
Sbjct 512 CTGACACCATTGACAACGTTAAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACC 571
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || ||||| || ||||| ||||| ||| | |||||| ||| ||| | | |||||||
Sbjct 572 AGCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGGACCCTTGCTGATTACA 631
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| || || || || || ||| | ||||| || | || |||| || |||
Sbjct 632 ATATCCAGAAGGAGTCGACCCTCCATTTGGTGCTTCGTCTGCGTGGTGGT 681
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || || || || || || |||| | || ||||| | | |
Sbjct 1138 ATGCAGATCTTTGTCAAGACCTTGACTGGAAAGACCATCACCTTGGAGGTGGAGAGCTCA 1197
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || || || || |||||||||||||| ||||| || ||
Sbjct 1198 GACACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAG 1257
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| ||||| || || ||| | |||||| ||| ||| | | || ||||||
Sbjct 1258 CAGAGGCTTATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCTGACTACAAC 1317
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || ||||||||| | ||||| ||
Sbjct 1318 ATCCAGAAGGAATCCACCCTTCATTTGGT 1346
>seq171660
Length=1062
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| ||||| | || || || || |||| ||||| || |||| |
Sbjct 194 AGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTTGAGGTTGAAAGCT 253
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| || ||||| ||| || |||||||||||||| ||||| || || |
Sbjct 254 CTGACACTATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGAATTCCCCCGGACC 313
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
||||| | || || ||||| ||||| ||| | ||||| || || || | || ||||
Sbjct 314 AACAAAGGCTGATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGGACACTCGCTGACTACA 373
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTT 22428
|||| |||||||| ||||| | || || |||
Sbjct 374 ACATCCAAAAAGAGTCCACTCTCCACTTGGTT 405
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || || || |||| || || ||||||| | ||
Sbjct 652 ATGCAGATCTTTGTAAAGACGCTTACTGGGAAGACAATCACCCTGGAGGTGGAAAGCTCC 711
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || |||| || || || ||||||||||||||||| || |||||
Sbjct 712 GATACAATTGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAG 771
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || |||||||| ||||| | || | | || ||||||
Sbjct 772 CAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGACGGAAGAACTCTTGCAGACTACAAC 831
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||||| ||||| ||| | || || ||| | ||| |||| || ||
Sbjct 832 ATTCAAAAGGAATCAACCTTGCACTTGGTTCTCCGACTGCGTGGTGG 878
Score = 116 bits (128), Expect = 3e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| ||| | || || || || |||| | || || || | |
Sbjct 424 ATGCAGATCTTTGTTAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGTTCT 483
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || |||| ||| || || ||||||||||| || || || |||||
Sbjct 484 GATACAATCGATAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATACCCCCAGATCAG 543
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||||||||||||| |||||||| ||||||| | ||||||||||
Sbjct 544 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGCACCCTTGCCGATTACAAT 603
Query 22399 ATTCAAAAAGAATCCAC 22415
|| ||||| || || ||
Sbjct 604 ATCCAAAAGGAGTCTAC 620
Score = 100 bits (110), Expect = 2e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || || || |||| | || ||||||| | ||
Sbjct 880 ATGCAGATCTTTGTAAAGACGCTTACTGGGAAGACAATCACCTTGGAGGTGGAAAGCTCC 939
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || |||| |||||| || |||||||||||||| || || |||||
Sbjct 940 GATACAATTGACAATGTCAAGGCAAAAATCCAGGACAAGGAGGGTATCCCCCCAGATCAG 999
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373
|| | || || ||||| || |||||||| |||||
Sbjct 1000 CAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGA 1034
>seq186836
Length=3669
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||||| || ||||| || || || || |||| || || || || | | |
Sbjct 688 ATGCAGGTTTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTCGAGGTAGAGAGCTCT 629
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || ||||| || |||||||| ||||||||||| || || |||||
Sbjct 628 GATACCATTGACAATGTCAAAGCCAAGATTCAAGATAAGGAGGGTATCCCGCCGGATCAG 569
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| || ||||| |||||| || || | ||||||| ||
Sbjct 568 CAAAGGTTGATCTTCGCCGGAAAGCAGTTGGAGGATGGTCGTACTTTGGCCGATTATAAT 509
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || ||||| |||||| | || | ||| |||| | || || |||
Sbjct 508 ATCCAGAAAGAGTCCACCCTGCACCTTGTTCTGCGTCTCCGTGGTGGT 461
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || ||||||| || || |||| || || || || | | ||
Sbjct 916 ATGCAGATCTTTGTAAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTAGAGAGCTCC 857
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | ||||| || || || ||||||||||| || || || || |||
Sbjct 856 GACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAA 797
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || |||||||| || ||| | ||||| ||| ||| || | || |||||
Sbjct 796 CAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGGACCCTCGCAGACTACAAT 737
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 736 ATCCAGAAGGAGTCGAC 720
>seq153096
Length=4879
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| ||||||| || || |||| || || || || | | ||
Sbjct 2988 ATGCAAATTTTCGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCC 3047
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || || ||||||||||| ||||| || || ||
Sbjct 3048 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 3107
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || ||||| || ||||| |||||| ||| || | ||||||||||
Sbjct 3108 CAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGAACTTTGGCCGATTACAAT 3167
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || |||||| | ||||| || | || | ||||| |||
Sbjct 3168 ATCCAGAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTTCGCGGTGGT 3215
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| |||||||| || ||||| || || || || ||||| | || || || | | |
Sbjct 3443 GATGCAGATTTTTGTGAAGACTTTGACAGGCAAGACCATCACTTTGGAGGTTGAGAGCTC 3502
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|||||| | || || ||||| || || || || ||||| || || ||||| || ||
Sbjct 3503 GGATACCATTGATAATGTCAAAGCCAAGATCCAGGATAAGGAAGGGATCCCACCGGACCA 3562
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||| | | || ||||||||||| ||| | ||||| || ||| | | ||||||||
Sbjct 3563 GCAAAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCTGATTACAA 3622
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGT 22427
|||||| || || |||||| | || || ||
Sbjct 3623 CATTCAGAAGGAGTCCACCCTTCACTTGGT 3652
>seq117973
Length=1091
Score = 118 bits (130), Expect = 9e-22
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| ||||| | || || || || |||| || || || |||| |
Sbjct 475 AGATGCAGATCTTTGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTTGAAAGCT 534
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| || |||| ||| || |||||||||||||| || || || || |
Sbjct 535 CTGACACTATTGACAATGTCAAGGCAAAGATCCAAGACAAGGAGGGAATCCCCCCAGACC 594
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| ||| | || || ||||| ||||| ||| | ||||| ||| || | | || ||||
Sbjct 595 AGCAAAGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACACTTGCTGACTACA 654
Query 22397 ACATTCAAAAAGAATCCACC 22416
||||||||||||| ||||||
Sbjct 655 ACATTCAAAAAGAGTCCACC 674
Score = 118 bits (130), Expect = 9e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || |||| | || || || | | |
Sbjct 705 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAGACCATCACATTGGAGGTTGAGAGCTCT 764
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || |||| ||| ||||| ||||||||||| || || || |||||
Sbjct 765 GACACAATCGATAATGTCAAGGCAAAGATTCAGGACAAGGAGGGCATCCCCCCAGATCAG 824
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||||||||||||| |||||||| ||| || || | ||||||||
Sbjct 825 CAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGTACACTCGCAGATTACAAT 884
Query 22399 ATTCAAAAAGAATCCACC 22416
|| |||||||| ||||||
Sbjct 885 ATCCAAAAAGAGTCCACC 902
Score = 100 bits (110), Expect = 2e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | || || || || |||| | || ||||||| | |
Sbjct 933 ATGCAAATCTTTGTGAAGACCCTTACTGGGAAGACAATCACATTGGAGGTGGAAAGCTCT 992
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || | ||| ||| || || ||||||||||||||||| || |||||
Sbjct 993 GATACAATTGACAATGTTAAAGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAG 1052
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373
|| | || || ||||| || |||||||| |||||
Sbjct 1053 CAGAGGCTCATCTTTGCAGGTAAACAGTTGGAGGA 1087
>seq6123
Length=1345
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||| | || || ||||| | || | || || || | |
Sbjct 983 ATGCAAATCTTTGTGAAGACTCTCACTGGGAAAACCATAACCTTGGAGGTTGAGAGTTCT 1042
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | || ||| ||||| || || |||||||| ||||| || ||
Sbjct 1043 GACACCATTGACAACGTGAAGGCAAAGATTCAGGATAAAGAGGGTATCCCACCAGACCAG 1102
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | |||||| ||||||| | | |||||||||
Sbjct 1103 CAGAGACTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTGGCTGATTACAAC 1162
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|||||||| || |||||| | ||||||||
Sbjct 1163 ATTCAAAAGGAGTCCACCCTTCATTTAGT 1191
>seq192635
Length=3999
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| |||||||| || || || ||||| |||| || || ||| |||| | || |||||
Sbjct 1647 GTCAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTGGAG 1706
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
|| |||| ||| | ||| || | || || ||||||||||||||||| || || ||
Sbjct 1707 TCCTCCGACACCATCGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGCATCCCGCCG 1766
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|| || || || || || || ||||| |||||| | ||||| ||| || || ||||
Sbjct 1767 GACCAGCAGCGCCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACTCTCGCCGAC 1826
Query 22393 TACAACATTCAAAAAGAATCCAC 22415
|||||||| || || || || ||
Sbjct 1827 TACAACATCCAGAAGGAGTCGAC 1849
>seq13283
Length=967
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | ||||| ||||| ||| | | |||||||||| | |
Sbjct 799 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAAACCATCATTGTGGAAGTGGAAAGCTCT 740
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | ||| |||||||||||||||||||||||||| || || ||
Sbjct 739 GACACCATTGATAATGTGAAAGCTAAAATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 680
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| ||||| ||| | |||||| | || | | || || ||
Sbjct 679 CAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAGGATGGAAGGACACTTGCTGACTATAAT 620
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || ||||| | || || || | || ||||| | |||
Sbjct 619 ATTCAAAAGGAGTCCACTCTGCACTTGGTGCTTCGTCTGCGCAGTGGT 572
>seq58964
Length=436
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || ||||| ||||| ||||| | ||| | |||||||||| | |
Sbjct 327 ATGCAAATTTTTGTGAAGACTTTGACCGGGAAAACCATTACTTTGGAAGTGGAAAGCTCA 268
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | |||| ||| ||||| ||||| || || ||||| || || ||
Sbjct 267 GACACAATTGATAACGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCAG 208
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | ||||| | | || | | |||||||||
Sbjct 207 CAGAGGCTCATCTTTGCAGGAAAGCAGCTTGAGGACGGCAGGACACTGGCAGATTACAAC 148
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
||||| ||||| || || | ||||| ||
Sbjct 147 ATTCAGAAAGAGTCGACTCTGCATTTGGT 119
>seq155400
Length=901
Score = 109 bits (120), Expect = 5e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||||||||| || |||||| | ||||| || || ||||| |||| || || | |
Sbjct 691 AATATGCAAATTTTCGTGAAAACTCTGACCGGGAAGACCATCACTATTGAGGTCGAGAGC 632
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| |||||| | ||| || ||||| || || || ||||| || || || || || |||
Sbjct 631 AGTGATACCATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATCCCTCCAGAT 572
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
||||| | || || ||||| ||||| || | || ||| | | || | | ||||||
Sbjct 571 CAACAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGCAGAACTCTTGCGGATTAC 512
Query 22396 AACATTCAAAAAGAATCCAC 22415
||||| ||||| || || ||
Sbjct 511 AACATCCAAAAGGAGTCGAC 492
>seq7966
Length=1209
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | ||||| ||||| ||||| | |||||||||| | |
Sbjct 1096 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAAACCATCACTTTGGAAGTGGAAAGCTCT 1037
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | ||| |||||||| || |||||||||||||| || || ||
Sbjct 1036 GACACCATAGATAATGTGAAAGCTAAAATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 977
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || ||| | |||||| | || | | || || ||
Sbjct 976 CAGAGGTTGATTTTTGCAGGTAAGCAGCTTGAGGATGGAAGGACACTTGCAGACTATAAT 917
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || ||||| | || || || | || ||||||| |||
Sbjct 916 ATTCAAAAGGAGTCCACTCTGCACTTGGTGCTTCGTCTGCGCGGTGGT 869
>seq165785
Length=1301
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | ||||| || || ||||| || || ||||| | | ||
Sbjct 1031 ATGCAGATCTTTGTGAAGACGCTTACCGGCAAGACCGTCACCCTCGAGGTGGAGAGCTCC 1090
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | ||||| || || || ||||||||||| || || || ||||||
Sbjct 1091 GACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGATCAA 1150
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || |||||||| || ||| | ||||| ||| ||| || | || |||||
Sbjct 1151 CAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGGACCCTCGCTGACTACAAT 1210
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 1211 ATCCAGAAGGAGTCGAC 1227
>seq115308
Length=3903
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| |||| || || || |||| || || ||||| | | ||
Sbjct 3790 ATGCAGATATTCGTGAAAACCCTAACGGGCAAGACCATCACCCTCGAGGTGGAGAGCTCC 3731
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || || ||||||||||| || || || || ||
Sbjct 3730 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 3671
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || || |||||||| ||||| |||||| |||||| || | ||||| |||
Sbjct 3670 CAGAGGCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTCGCAGATTATAAC 3611
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 3610 ATCCAGAAGGAGTCTAC 3594
>seq1224
Length=2434
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || ||||||| || || || | | ||
Sbjct 2356 ATGCAGATCTTCGTGAAGACCCTTACCGGAAAGACCATCACTCTCGAGGTCGAGAGCTCC 2297
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || || || ||||||||||| ||||| || |||||
Sbjct 2296 GACACGATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCGGATCAG 2237
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || ||||| || ||||| ||||| | | ||| | ||||||||||
Sbjct 2236 CAGAGATTGATCTTCGCCGGTAAGCAGTTGGAGGACGGCAGGACCCTGGCCGATTACAAT 2177
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || ||| | || || || | |||||| | || |||
Sbjct 2176 ATCCAGAAGGAGTCGACCCTTCACTTGGTGCTCCGATTGAGGGGTGGT 2129
>seq115535
Length=1238
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| ||||||| || ||| ||||||| || || || | | |
Sbjct 597 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATCACTCTCGAGGTCGAGAGCTCT 656
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || || || |||||||| ||||| || || || ||
Sbjct 657 GATACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAG 716
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || || | |||||| || ||| | | |||||||||
Sbjct 717 CAGAGGTTGATCTTTGCAGGGAAGCAACTCGAGGATGGTCGTACCCTGGCTGATTACAAC 776
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || || || | ||||| ||
Sbjct 777 ATCCAGAAGGAGTCGACTTTGCATTTGGT 805
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| ||||||| || || |||| || || || || | | |
Sbjct 369 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACTATCACCCTCGAGGTCGAGAGCTCT 428
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || || ||||||||||| || || ||||| ||
Sbjct 429 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 488
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || ||||| ||||| || ||| | ||||| ||| || | |||| ||||||
Sbjct 489 CAGAGGCTCATATTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTTTGGCCGACTACAAC 548
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 549 ATCCAGAAGGAGTCGAC 565
>seq59837
Length=433
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||||| || || ||||| | ||| | |||||||||| | |
Sbjct 107 ATGCAAATCTTTGTGAAGACTTTGACAGGGAAAACTATTACTTTGGAAGTGGAAAGCTCA 166
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || |||| || ||||| ||||| || || ||||| || || ||
Sbjct 167 GACACAATTGATAATGTCAAGGCGAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCAG 226
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | |||||| | || | | |||||||||
Sbjct 227 CAGAGGCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTAGGACACTGGCAGATTACAAC 286
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || || || | ||||| ||
Sbjct 287 ATACAGAAGGAGTCAACTCTGCATTTGGT 315
>seq632
Length=3551
Score = 89.7 bits (98), Expect = 4e-13
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|||| ||| | | | |||||||| || | || |||||| | ||| || |||||
Sbjct 2176 ACCGATAAGATGATAACTCTTGAGGTTGGAAGATTGGATACCATTGACAATGTCAAAGCC 2117
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| ||||||||||| || || || || ||||| ||| | || | |||||| |||||
Sbjct 2116 AAAATACAAGACAAGGAAGGAATCCCCCCTGATCAGCAAAGGCTGAAATTTGCTGGCAAG 2057
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATA 22419
| | | |||||| | |||| | | || ||||| || ||| || |||||||||
Sbjct 2056 CTGCTCGAGGATGTCTGCACTCTTGCTGACTACAATATCAGAAAGGACTCCACCATA 2000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418649768610700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |