Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq12378 104 3e-17 >seq12378 Length=999 Score = 104 bits (114), Expect = 3e-17 Identities = 138/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || ||||||||||| || ||||| | ||| || |||| || || ||||| | || Sbjct 224 TGGAGCCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTCAGACCCGGCATCAACCCG 165 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | || ||||||||||| || || || || ||||| || |||||||| || ||||| ||| Sbjct 164 CGCTTTTTTAGCCAAAATATCGCGCAGAAGCTTCCCGAGAAGAAGATCCCTTCCACGCAG 105 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAG--GTCGAGACTTGTCGAACCACTTGAGAGCCC 119685 ||||| || | | ||||| ||||||| |||| | ||||| ||| || || |||| Sbjct 104 GCGAAGGCCACGATCCGCTCCGCAAAAGTCTCCGAGCC--GTCGATCCATTTCAGGGCCC 47 Query 119686 AGTTGGCCTT 119695 | | ||||| Sbjct 46 ACTGCGCCTT 37 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587424195484000