Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq150930 104 2e-17 seq6123 104 2e-17 seq117973 102 5e-17 seq171660 95.1 8e-15 seq153096 95.1 8e-15 seq186836 93.3 3e-14 seq200298 91.5 1e-13 seq165785 87.8 1e-12 seq192635 86.0 4e-12 seq7966 86.0 4e-12 seq115308 84.2 1e-11 seq115535 82.4 5e-11 seq48558 82.4 5e-11 seq1224 82.4 5e-11 >seq150930 Length=8867 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| ||| ||| ||||| ||||| || || | ||| | || |||| || Sbjct 1118 ACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATCCTCA 1059 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||||||||| || || | ||||||||| | || | ||||||||||| | Sbjct 1058 AGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGA 999 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | || | ||| | ||| || || | ||| ||||| ||| Sbjct 998 ATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTT 939 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| || |||||||||||| Sbjct 938 CCTGTCAAGGTCTTGACGAAGATCTGCATA 909 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| | ||| | || |||| || ||||| || |||||||| Sbjct 872 TCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCCATCCTCAAGCTGCTTCCCGGCAAAG 813 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||||||| | || | || |||||||| |||||| |||||| Sbjct 812 ATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTG 753 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || || | ||| ||||| ||||| || | |||||| ||| Sbjct 752 TCAATGGTGTCAGAGCTCTCGACCTCAAGGGTGATGGTCTTTCCAGTCAAAGTCTTGACA 693 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 692 AAGATCTGCATA 681 >seq6123 Length=1345 Score = 104 bits (114), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || ||||| || ||||| | |||| | ||| |||| || ||||| ||||| ||||| Sbjct 946 TTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAA 887 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || |||| |||||||||| | || | || ||||| || || || |||||| | Sbjct 886 AATCAGTCTTTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGGATTTTGGCTTTGAC--A 829 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| ||| | ||||| || | ||| ||||| || || |||||||||| Sbjct 828 T--TGTCGATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCT 771 Query 34966 TCACAAAGATCTGCAT 34981 | || ||||||||||| Sbjct 770 TAACGAAGATCTGCAT 755 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || || |||| ||| || || |||||||| || || | ||| | || |||| || Sbjct 1191 ACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGGCCATCCTCA 1132 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || |||| ||||||||| | || | ||||| || || | Sbjct 1131 AGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCTTTATCCTGA 1072 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| |||||| || | |||||||||||| Sbjct 1071 ATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTATGGTTTTC 1012 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || |||||||||||||||||||| ||||| Sbjct 1011 CCAGTGAGAGTCTTCACAAAGATTTGCAT 983 >seq117973 Length=1091 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| ||||| |||||||| ||||| | ||| |||| | || || Sbjct 685 ACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCAAGTGTTCGGCCGTCCTCG 626 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || | |||||||||| | || | ||||||||||| Sbjct 625 AGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGG 566 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | || | ||| | ||||| |||| ||| || || || Sbjct 565 ATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCGAGGGTGATAGTCTTG 506 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||||||||||||||| Sbjct 505 CCTGTGAGGGTTTTCACAAAGATCTGCAT 477 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| ||||| || || || || || | || | || |||| || Sbjct 913 ACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCTGCGAGTGTACGGCCATCCTCT 854 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || || | ||||| ||| | || | ||||||||||| | Sbjct 853 AGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGA 794 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || ||||||| ||| | |||||| || | || ||||| Sbjct 793 ATCTTTGCCTTGAC--AT--TATCGATTGTGTCAGAGCTCTCAACCTCCAATGTGATGGT 738 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||||||||| |||||||||||||| Sbjct 737 CTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 705 >seq171660 Length=1062 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || || || || || || || || | |||| | || |||| || Sbjct 632 ACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAATCGGCAAGGGTGCGGCCATCCTCT 573 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || || | ||||| ||| | || | ||||||||||| Sbjct 572 AGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTGGGGGTATGCCCTCCTTGTCCTGG 513 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || ||||||| ||| |||||| || | || ||||| Sbjct 512 ATCTTTGCCTTGAC--AT--TATCGATTGTATCAGAACTCTCAACCTCCAATGTGATGGT 457 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||||||||| |||||||||||||| Sbjct 456 CTTCCCTGTGAGAGTCTTAACAAAGATCTGCAT 424 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| ||||| || ||||| ||||| | || | || | || || Sbjct 405 AACCAAGTGGAGAGTGGACTCTTTTTGGATGTTGTAGTCAGCGAGTGTCCGCCCGTCCTC 346 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || ||||| || || | ||| ||||| | || | ||||||||||| Sbjct 345 AAGCTGCTTGCCAGCAAAGATCAGCCTTTGTTGGTCCGGGGGAATTCCCTCCTTGTCTTG 286 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| |||||| | || | ||| | ||||| || | ||| ||||| || Sbjct 285 GATCTTTGCTTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTT 226 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||||||||||||||| Sbjct 225 GCCTGTGAGGGTTTTCACAAAGATCTGCAT 196 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | || ||| || |||||||| ||||| | ||| ||| | | || || Sbjct 861 AACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCTGCAAGAGTTCTTCCGTCCTC 802 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || |||||| || ||||| || || | ||||| ||| | || | ||||||||||| Sbjct 801 CAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTG 742 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATT-CACCGG---CCTCAACATCGACGGTTATGG 34947 |||||| ||||| || | || ||| | ||| || || || | ||| || | Sbjct 741 GATCTTCGCCTTGAC--AT--TGTCAATTGTATCGGAGCTTTCCACCTCCAGGGTGATTG 686 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || || ||||| |||||||||||||| Sbjct 685 TCTTCCCAGTAAGCGTCTTTACAAAGATCTGCAT 652 >seq153096 Length=4879 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||||||||| || || | ||| | || | || || Sbjct 3652 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTACGACCGTCCTCG 3593 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || | | ||||||||| | || | ||| ||||| || Sbjct 3592 AGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGG 3533 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 ||||| |||||| || |||| || | ||| || |||||| || | || ||||| Sbjct 3532 ATCTTGGCTTTGAC--AT--TATCAATGGTATCCGAGCTCTCAACCTCCAAAGTGATGGT 3477 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || | |||||||||||| |||||||| Sbjct 3476 CTTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 3444 >seq186836 Length=3669 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| | ||| | || | || || ||||| ||||||||||| Sbjct 726 TCCTTCTGGATATTGTAGTCTGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCAAAG 785 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | || |||||| | || | ||||||||||| ||||| ||||||| Sbjct 786 ATGAGCCTCTGTTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTG 845 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| ||| ||||| || || || || ||||| ||| Sbjct 846 TCGATGGTGTCGGAGCTCTCTACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTTACA 905 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 906 AAGATCTGCAT 916 Score = 86.0 bits (94), Expect = 4e-12 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848 |||||||| || ||||| || | |||| | || |||| |||| ||| |||||||| | Sbjct 498 TCTTTCTGGATATTATAATCGGCCAAAG--TACGACCATCCTCCAACTGCTTTCCGGCGA 555 Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908 | || | | |||||| || |||| | |||||||| || |||||| |||||| Sbjct 556 AGATCAACCTTTGCTGATCCGGCGGGATACCCTCCTTATCTTGAATCTTGGCTTTGACAT 615 Query 34909 ATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 | || | ||| | ||| || |||| ||| ||||| || || || | |||||||| Sbjct 616 TGTCAATGGTATCAGAGCTCTCTACCTCGAGGGTGATGGTCTTGCCAGTCAAAGTCTTCA 675 Query 34969 CAAAGATCTGCAT 34981 |||| | |||||| Sbjct 676 CAAAAACCTGCAT 688 >seq200298 Length=1237 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 34747 AATCATT--TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTT 34804 ||||||| |||||||||||||||||| || | ||| | || ||||| || || || Sbjct 582 AATCATTGTTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATATT 641 Query 34805 ATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTG 34864 ||| || | |||| |||| |||| |||| ||| || || ||||| || |||| ||||| Sbjct 642 ATAATCTGCAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGCTG 701 Query 34865 GTCTTGCGGCACCCCCTCCTTGTC 34888 ||| | || | || |||||||| Sbjct 702 ATCTGGAGGGATGCCTTCCTTGTC 725 >seq165785 Length=1301 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| | ||| | || | || || ||||| ||||||||||| Sbjct 1221 TCCTTCTGGATATTGTAGTCAGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCAAAG 1162 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | || || ||| | || | ||||||||||| ||||| ||||||| Sbjct 1161 ATGAGCCTCTGTTGATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTG 1102 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| ||| | ||| || || || || ||||||||| Sbjct 1101 TCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGACGGTCTTGCCGGTAAGCGTCTTCACA 1042 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 1041 AAGATCTGCAT 1031 >seq192635 Length=3999 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/198 (70%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || || |||||||||||||| || Sbjct 1843 TCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 1784 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| |||||| || || || Sbjct 1783 ATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGAATCTTGGCCTTCAC--AT 1726 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || || ||| || || | || || || || ||||| || || || Sbjct 1725 --TGTCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTT 1668 Query 34967 CACAAAGATCTGCATATT 34984 ||| ||||||||||| || Sbjct 1667 CACGAAGATCTGCATCTT 1650 >seq7966 Length=1209 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||||||||| || || | ||| | | |||| || ||||| Sbjct 665 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTG 724 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||||| || ||||| || | ||||||||| | || | |||||||| || |||||| Sbjct 725 CTTTCCAGCGAATATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGAATCTT 784 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 ||| || | |||| || ||| || || | |||||||| || || || Sbjct 785 GGCTTTCACATTGTCAATCGTATCTGAACTCTCTACCTCCAATGTTATGGTCTTCCCTGT 844 Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || ||||||||||||||| Sbjct 845 CAGAGTTTTGACAAAGATCTGCATA 869 >seq115308 Length=3903 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| |||||||| || | || | || |||| |||| ||| || ||||| || Sbjct 3600 TCCTTCTGGATGTTATAATCTGCGAGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAG 3659 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||||||| | || | ||||||||||| ||||| |||||| Sbjct 3660 ATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 3719 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| ||| ||||| || ||||| || || ||||| Sbjct 3720 TCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTTTTCACG 3779 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 3780 AATATCTGCAT 3790 >seq115535 Length=1238 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848 || ||||| ||||| ||||| | |||| | || | || || ||||| |||||||| | Sbjct 559 TCCTTCTGGATGTTGTAGTCGGCCAAAGTC--CGGCCGTCCTCGAGCTGCTTTCCGGCGA 502 Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908 |||| || | |||||||| | || | ||||||||||| ||||| |||||| Sbjct 501 ATATGAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGT 442 Query 34909 ATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 | || | ||| | ||| || |||| ||| || || || || || || || |||| Sbjct 441 TGTCGATGGTGTCAGAGCTCTCGACCTCGAGGGTGATAGTCTTGCCGGTTAGGGTTTTCA 382 Query 34969 CAAAGATCTGCAT 34981 | ||||||||||| Sbjct 381 CGAAGATCTGCAT 369 >seq48558 Length=489 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || ||| || || || || ||||| | ||| || |||| || Sbjct 335 ACCAGGTGAAGGGTAGATTCCTTTTGGATATTGTAGTCAGCCAGGGCGCGGCCATCCTCA 276 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || |||| ||||||||| | || | || || || || Sbjct 275 AGCTGCTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCTTCTTTATCTTGG 216 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| |||||| || | |||||||||||| Sbjct 215 ATCTTTGCCTTCACGTTGTCAATGGTGTCAAAACTCTCAACCTCCAAGGTTATGGTTTTC 156 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||||||||||||||||| || ||| Sbjct 155 CCAATGAGAGTCTTCACAAAGATTTGTATA 126 >seq1224 Length=2434 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || |||||||| | | |||||||||| || || ||||| || || || || | Sbjct 2130 CCACCCCTCAATCGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCC 2189 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | | | || |||| ||| || ||||| || || | || ||||| || | || Sbjct 2190 AGGGTCCTGCCGTCCTCCAACTGCTTACCGGCGAAGATCAATCTCTGCTGATCCGGGGGA 2249 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| |||||| | |||| || | ||| || Sbjct 2250 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATCGTGTCGGAGCTCTCGACC 2309 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| || ||||| ||||| || || |||||||| |||||||||||| Sbjct 2310 TCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAGATCTGCATA 2357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323799654831840