Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06]
210,780 sequences; 203,686,407 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq124089 105 9e-18
>seq124089
Length=1327
Score = 105 bits (116), Expect = 9e-18
Identities = 152/212 (72%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 32633 GTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACAAACCCTTCTTCA 32692
||||||| |||||||||| | ||||| || ||||||||||| ||||| || | |||
Sbjct 1131 GTTTCAAGAGTAACATCAGAGGAAGGATAGGCGACACAAGTGAGGACAAAGCCACCATCA 1072
Query 32693 ATTTGATCATCATCCAAGAACG-ACTGATCACTTTGGTCTACTGTACCAGATACAATCTT 32751
|| || ||||||| |||||| | ||| ||| ||||| || || ||| |||| |||
Sbjct 1071 ATCTGGTCATCAT-CAAGAAAGCTCTGGTCAGACTGGTCGACGGTGCCATCAACAACCTT 1013
Query 32752 ACCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCAACCCCACCTTC 32811
|| || || || || |||| ||| || ||||| ||||| | || | || | ||
Sbjct 1012 GCCGGCGCAGGAAGAGCAGGAACCGGCGCGACAGGAGTAAGGGAGGTCGAGACCTGCCTC 953
Query 32812 CTCTGCTGCATCAAGGATGTATTGATCATCAG 32843
||| || || || || ||||| ||||||||
Sbjct 952 CTCGGCGGCGTCGAGAATGTAGACATCATCAG 921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 663740988629600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |