Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq161483 187 4e-41 >seq161483 Length=5526 Score = 187 bits (206), Expect = 4e-41 Identities = 186/241 (77%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| || || || ||||||||| |||||| ||| ||| ||| Sbjct 1406 TGTACTTGGTCACAGCCTTGGTGCCTTCAGACACGGCGTGCTTGGCCAATTCACCGGGCA 1465 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || || || ||||||||||| |||| | ||| ||| ||||||||| | Sbjct 1466 GGAGGAGACGGACAGCAGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAGT 1525 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| ||||| |||||| | | |||| | |||| |||||||| || || ||||||| Sbjct 1526 GCGCCAAGCGGCTGGCCTCAGCGGCGATCCTCTCGAAGATGTCGTTCACGAAGGAGTTCA 1585 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | ||| |||||| || |||||||||||| ||||| || || |||| Sbjct 1586 TGATGGACATGGCCTTGGAGGAGATACCGGTGTCGGGGTGCACTTGCTTAAGTACTTTGT 1645 Query 1485710 A 1485710 | Sbjct 1646 A 1646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7893824770032420