Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06]
210,780 sequences; 203,686,407 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq161483 187 4e-41
>seq161483
Length=5526
Score = 187 bits (206), Expect = 4e-41
Identities = 186/241 (77%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||| || |||||||| || || || ||||||||| |||||| ||| ||| |||
Sbjct 1406 TGTACTTGGTCACAGCCTTGGTGCCTTCAGACACGGCGTGCTTGGCCAATTCACCGGGCA 1465
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| || || || || ||||||||||| |||| | ||| ||| ||||||||| |
Sbjct 1466 GGAGGAGACGGACAGCAGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAGT 1525
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||| ||||| |||||| | | |||| | |||| |||||||| || || |||||||
Sbjct 1526 GCGCCAAGCGGCTGGCCTCAGCGGCGATCCTCTCGAAGATGTCGTTCACGAAGGAGTTCA 1585
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| | ||| |||||| || |||||||||||| ||||| || || ||||
Sbjct 1586 TGATGGACATGGCCTTGGAGGAGATACCGGTGTCGGGGTGCACTTGCTTAAGTACTTTGT 1645
Query 1485710 A 1485710
|
Sbjct 1646 A 1646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7893824770032420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |