Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq117973 149 5e-31 seq13283 141 7e-29 seq7966 138 9e-28 seq150930 132 4e-26 seq6123 132 4e-26 seq186836 127 2e-24 seq59837 111 1e-19 seq58964 107 1e-18 seq1224 104 2e-17 seq200298 100 2e-16 seq153096 96.9 3e-15 seq171660 93.3 3e-14 seq115308 84.2 2e-11 seq632 82.4 6e-11 >seq117973 Length=1091 Score = 149 bits (164), Expect = 5e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| || || ||||| |||||||||||||| || || |||| || || || Sbjct 688 AGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGCAAGTGTTCGGCCGTCC 629 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || ||||||||| | |||| |||||||| || || || || ||||| |||||| Sbjct 628 TCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCT 569 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| |||||| | || | ||||||||| ||| || || || || ||||| Sbjct 568 TGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCTTTCAACCTCGAGGGTGATAGTC 509 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | |||||| ||||| |||||||| Sbjct 508 TTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 477 >seq13283 Length=967 Score = 141 bits (156), Expect = 7e-29 Identities = 165/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 29568 CAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCG 29627 || ||| |||||||| || || ||||| || |||||||| ||||| || |||| || | Sbjct 581 CAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCAAGTGTCCT 640 Query 29628 AGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTC 29687 ||| || || || ||||| ||| | ||||| || ||||| || || ||||||||||| Sbjct 641 TCCATCCTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTC 700 Query 29688 TTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAG 29746 |||||||| |||||| | ||| ||| | || | |||||||| ||| ||||| | | Sbjct 701 CTTGTCTTG-AATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCCACTTCCACAA 759 Query 29747 TTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || |||||||| || | ||| || ||||| || ||||| Sbjct 760 TGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 799 >seq7966 Length=1209 Score = 138 bits (152), Expect = 9e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| |||||||| || || ||||| || |||||||| ||||| || ||| Sbjct 870 CCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCTGCA 929 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || || || || || ||| | ||||| || ||||| || || ||| Sbjct 930 AGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGGGGA 989 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| || || || |||||| | ||| ||| | |||| |||||||| ||| || Sbjct 990 ATACCCTCCTTATCCTG-AATTTTAGCTTTCACATTATCTATGGTGTCAGAGCTTTCCAC 1048 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || |||||||| || | ||| || ||||| || ||||| Sbjct 1049 TTCCAAAGTGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 1096 >seq150930 Length=8867 Score = 132 bits (146), Expect = 4e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||||||||| |||||||| || || ||||| ||||| || | |||||| Sbjct 1125 ACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCC 1066 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | || | || ||||| || || || |||||||| || Sbjct 1065 ATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTT 1006 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | |||||| | || | ||||||||| || || ||||| || | Sbjct 1005 GTCCTG-AATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGA 947 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || ||||| || || || |||||||| Sbjct 946 TGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 910 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| ||||||||||| || || || || || || || || ||||| ||| Sbjct 680 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCA 621 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || ||||||||| | |||| | ||||| ||||| || Sbjct 620 AGGGTCCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 561 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || ||| || | || || | || | ||||||||| || || Sbjct 560 ATTCCCTCCTTGTCCTG-AATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCAC 502 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| ||||| || | |||||| || || || ||||| Sbjct 501 CTCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 454 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||||||||| |||||||| || || ||||| || || || | ||| || Sbjct 1353 ACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCC 1294 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | || ||||| || || || |||||||| || Sbjct 1293 ATCCTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTT 1234 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| | || | ||||| || || || || | || || Sbjct 1233 GTCCTGGATCTTAGCCTTCACATTGTCGATGGTGTCTGAGCTCTCCACCTCCAAGGTGAT 1174 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| ||||| || ||||| |||||||| Sbjct 1173 GGTCTTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 1138 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || || || || || || || || || || || | |||||| Sbjct 897 ACGAAGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCTAGGGTGCGGCC 838 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | || | || ||||| || || ||||| || || || Sbjct 837 ATCCTCAAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTT 778 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | ||||| | || | |||||||| || || ||||| || | Sbjct 777 GTCCTG-AATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACCTCAAGGGTGA 719 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| || || || ||||| |||||||| Sbjct 718 TGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 682 >seq6123 Length=1345 Score = 132 bits (146), Expect = 4e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| |||||||| ||||| || ||||||||||| ||||| || | |||||| Sbjct 1198 ACGAAGCACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGGCC 1139 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | ||| ||||| || || || ||||||||||| Sbjct 1138 ATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATACCCTCTTT 1079 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| |||| || || | || | ||||||||| || || || | |||| Sbjct 1078 ATCCTG-AATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACCTCCAAGGTTA 1020 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| ||||| | || || ||||| || ||||| Sbjct 1019 TGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCAT 983 >seq186836 Length=3669 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| || | || || ||||| ||||| || || |||||||| || | || ||| Sbjct 473 ACGCAGAACAAGGTGCAGGGTGGACTCTTTCTGGATATTATAATCGGCCAAAGTACGACC 532 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || || || | ||||| ||||||||||||||||| |||||||| || Sbjct 533 ATCCTCCAACTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGCGGGATACCCTCCTT 592 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| || | ||||||| | || | || ||||| ||||| || || || | Sbjct 593 ATCTTG-AATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTCTCTACCTCGAGGGTGA 651 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || |||||||| || || || ||||| | |||||| Sbjct 652 TGGTCTTGCCAGTCAAAGTCTTCACAAAAACCTGCAT 688 >seq59837 Length=433 Score = 111 bits (122), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || || || || || || ||||| ||||| || | || | | Sbjct 322 ACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCCAGTGTCCTACC 263 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | || | || ||||| || || ||||| || ||||| Sbjct 262 ATCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTT 203 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | |||||| | || | ||||| || ||| ||||| | ||| | Sbjct 202 GTCCTG-AATCTTCGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAA 144 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||||| || || || || || ||||| || |||||| Sbjct 143 TAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCATT 106 >seq58964 Length=436 Score = 107 bits (118), Expect = 1e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || || || ||||| |||||||| ||||| || | || | Sbjct 112 ACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCCAGTGTCCTGCC 171 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || || || ||| | || | || ||||| || || ||||| || ||||| Sbjct 172 GTCCTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTT 231 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| |||| ||||| | || | ||||| || ||| ||||| | ||| | Sbjct 232 GTCCTG-AATCTTTGCCTTGACGTTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAA 290 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | ||||| || || || || || ||||| || |||||| Sbjct 291 TGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCATT 328 >seq1224 Length=2434 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| || |||||||| ||||| || || || || || || || ||||| || Sbjct 2130 CCACCCCTCAATCGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCC 2189 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | || || | || || || || | |||||||| ||||||||||| ||| Sbjct 2190 AGGGTCCTGCCGTCCTCCAACTGCTTACCGGCGAAGATCAATCTCTGCTGATCCGGGGGA 2249 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || ||||| | || | ||||| || || || Sbjct 2250 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATCGTGTCGGAGCTCTCGACC 2309 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || || || | ||| || || || |||||||| Sbjct 2310 TCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAGATCTGCAT 2356 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||||||| || || || || || || || || |||||||||| || | ||| Sbjct 1917 AGCACCAAATGGAGGGTAGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCC 1976 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||| || ||||| | ||||| || ||||||||||| || || || || || || Sbjct 1977 TCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCC 2036 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||||| | || | || || || || || || || || || || Sbjct 2037 TGGATCTTGGCCTTGACGTTATCAATTGTATCGGAGCTCTCAACCTCCAGGGTAATGGTC 2096 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || ||||||||||| Sbjct 2097 TTCCCTGTCAAAGTCTTCACGAATATCTGCAT 2128 >seq200298 Length=1237 Score = 100 bits (110), Expect = 2e-16 Identities = 114/152 (75%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 29549 TTTATCGTTGT-CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATG 29607 || ||| |||| ||||||||||| | || ||| | || || || || |||||||| || Sbjct 580 TTAATCATTGTTCCTCCCCTCAACCTCAACACAAGGTGGAGAGTTGACTCTTTTTGGATA 639 Query 29608 TTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGC 29667 |||||||| |||| ||| ||| ||| || | || || |||||| | |||| ||| ||| Sbjct 640 TTATAATCTGCAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAAATCAGTCTCTGC 699 Query 29668 TGATCCGGCGGAATACCCTCTTTGTCTTGTAA 29699 ||||| || || || || || ||||| || || Sbjct 700 TGATCTGGAGGGATGCCTTCCTTGTCCTGAAA 731 >seq153096 Length=4879 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || ||||| || || || || || ||||| || | || || Sbjct 3203 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTGTAATCGGCCAAAGTTCGGCC 3144 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || || || | ||||| || ||||| ||||| ||||| ||||| || Sbjct 3143 ATCCTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTT 3084 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | ||||| || || || || || || || Sbjct 3083 GTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGAT 3024 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| |||| |||||| || || || ||||| Sbjct 3023 GGTCTTGCCGGTTAGGGTTTTCACGAAAATTTGCAT 2988 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||||||| || || || || || || || || |||||||||| || | ||| Sbjct 3427 AGCACCAAATGCAGAGTCGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTGCCATCC 3368 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||| || ||||| | ||||| || ||||||||||| || || || || || || Sbjct 3367 TCCAATTGCTTACCAGCGAAAATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCC 3308 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||||| | || | ||||| || || ||||| ||||| || || Sbjct 3307 TGGATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTCTCAACTTCGAGAGTGATTGTC 3248 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | || || || || || ||||| Sbjct 3247 TTCCCGGTGAGAGTCTTCACGAAGATTTGCAT 3216 >seq171660 Length=1062 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | || || || ||||| || | || ||||| ||||||||||| || || || Sbjct 879 TCCACCACGCAGTCGGAGAACCAAGTGCAAGGTTGATTCCTTTTGAATGTTGTAGTCTGC 820 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | || || | ||||| || ||| | || | || |||||||| || || Sbjct 819 AAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGG 760 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||| ||||| || | || |||||| | || | || || || ||| || Sbjct 759 AATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATTGTATCGGAGCTTTCCAC 700 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || || ||||| | || || ||||| ||||||||| Sbjct 699 CTCCAGGGTGATTGTCTTCCCAGTAAGCGTCTTTACAAAGATCTGCATT 651 >seq115308 Length=3903 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || || || || || || ||||||||||| || | ||||| Sbjct 3575 ACGAAGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTATAATCTGCGAGAGTGCGGCC 3634 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || ||||| || | || | || ||||| || || || || ||||| || Sbjct 3635 ATCCTCCAACTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTT 3694 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | ||||| || || || || || || || Sbjct 3695 GTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGAT 3754 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| |||| |||||| || ||||||||||| Sbjct 3755 GGTCTTGCCCGTTAGGGTTTTCACGAATATCTGCAT 3790 >seq632 Length=3551 Score = 82.4 bits (90), Expect = 6e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA-ATCATCGAGTTGTTTGCC 29648 ||||| || ||| || || || || |||| |||| ||| ||| ||||| | ||||| Sbjct 2004 GTGGAGTCCTTTCTGATATTGTAGTCAGCAAGAGTGC-AGACATCCTCGAGCAGCTTGCC 2062 Query 29649 AGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTT 29708 |||| || ||| ||||||||||| || || || || || |||||||||| ||| ||| Sbjct 2063 AGCAAATTTCAGCCTTTGCTGATCAGGGGGGATTCCTTCCTTGTCTTGTATTTTGGCTTT 2122 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||| | || | || || | | | || ||||||||||| Sbjct 2123 GACATTGTCAATGGTATCCAATCTTCCAACCTCAAGAGTTAT 2164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384229617619980